RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 RNF224P0DH78 156 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 CSH1P0DML2 217 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 CSH2P0DML3 217 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 ODC1P11926 461 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 CYP4B1P13584 511 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 ABCD3P28288 659 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 GPD2P43304 727 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 SOX2P48431 317 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 CASP6P55212 293 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 RIPPLY3P57055 190 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 NUCB1Q02818 461 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 COL10A1Q03692 680 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 FHL2Q14192 279 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 SEMA3AQ14563 771 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 RABEP1Q15276 862 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 GPR68Q15743 365 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 SUMO4Q6EEV6 95 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 INO80CQ6PI98 192 aaPredicted RBP5.42□□□□□ -1.54
SF3B3-214ENST00000572365 TPGS1Q6ZTW0 290 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 TMEM200AQ86VY9 491 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 ZNF366Q8N895 744 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 OR52N4Q8NGI2 321 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 SORCS1Q8WY21 1168 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 FAM20AQ96MK3 541 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 ZNF347Q96SE7 839 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 CD180Q99467 661 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 CTDSP1Q9GZU7 261 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 PRDM13Q9H4Q3 707 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 TTC12Q9H892 705 aaPredicted RBP5.42□□□□□ -1.54
SF3B3-214ENST00000572365 RPF1Q9H9Y2 349 aaKnown RBP5.42□□□□□ -1.54
SF3B3-214ENST00000572365 DNAJC17Q9NVM6 304 aaKnown RBP5.42□□□□□ -1.54
SF3B3-214ENST00000572365 DEC1Q9P2X7 70 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 CHORDC1Q9UHD1 332 aaPredicted RBP5.42□□□□□ -1.54
SF3B3-214ENST00000572365 PCDHA12Q9UN75 941 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 DTX4Q9Y2E6 619 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 DMRT1Q9Y5R6 373 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 OTOGQ6ZRI0 2925 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 NF1P21359 2839 aa5.42□□□□□ -1.54
SF3B3-214ENST00000572365 AKAP9Q99996 3911 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 PDZD2O15018 2839 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 NIPBLQ6KC79 2804 aaeCLIP5.41□□□□□ -1.54
SF3B3-214ENST00000572365 GOLGA6L10A0A0M3HER8 536 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 PROP1O75360 226 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 BAG4O95429 457 aaKnown RBP5.41□□□□□ -1.54
SF3B3-214ENST00000572365 WNT1P04628 370 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 MBL2P11226 248 aaPredicted RBP5.41□□□□□ -1.54
SF3B3-214ENST00000572365 CYP2A6P11509 494 aaPredicted RBP5.41□□□□□ -1.54
SF3B3-214ENST00000572365 CAPN3P20807 821 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 PRKCHP24723 683 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 CASP2P42575 452 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 NAMPTP43490 491 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 CLK3P49761 638 aaKnown RBP5.41□□□□□ -1.54
SF3B3-214ENST00000572365 NUCB2P80303 420 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 KLF10Q13118 480 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 NECTIN1Q15223 517 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 SEC23BQ15437 767 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 ZBTB6Q15916 424 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 NFIL3Q16649 462 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 ANXA2RQ3ZCQ2 193 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 C9orf57Q5W0N0 161 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 JADE1Q6IE81 842 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 RBM44Q6ZP01 1051 aaKnown RBP5.41□□□□□ -1.54
SF3B3-214ENST00000572365 PCGF5Q86SE9 256 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 TBC1D1Q86TI0 1168 aaPredicted RBP5.41□□□□□ -1.54
SF3B3-214ENST00000572365 METTL23Q86XA0 190 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 CATSPER3Q86XQ3 398 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 ARMC8Q8IUR7 673 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 BRSK2Q8IWQ3 736 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 BBS7Q8IWZ6 715 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 THEM5Q8N1Q8 247 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 PAQR4Q8N4S7 273 aaPredicted RBP5.41□□□□□ -1.54
SF3B3-214ENST00000572365 FAM98AQ8NCA5 519 aaKnown RBP5.41□□□□□ -1.54
SF3B3-214ENST00000572365 CCDC148Q8NFR7 591 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 RFWD2Q8NHY2 731 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 FAM110DQ8TAY7 271 aaPredicted RBP5.41□□□□□ -1.54
SF3B3-214ENST00000572365 ZCCHC10Q8TBK6 192 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 C2CD4CQ8TF44 421 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 ZFPM2Q8WW38 1151 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 IGSF8Q969P0 613 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 BIRC7Q96CA5 298 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 SIPA1Q96FS4 1042 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 APOPT1Q96IL0 206 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 IFT74Q96LB3 600 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 C7orf26Q96N11 449 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 FCRL5Q96RD9 977 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 NCAPGQ9BPX3 1015 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 SLC25A10Q9UBX3 287 aaPredicted RBP5.41□□□□□ -1.54
SF3B3-214ENST00000572365 SLC25A13Q9UJS0 675 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 SATB2Q9UPW6 733 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 STON1Q9Y6Q2 735 aa5.41□□□□□ -1.54
SF3B3-214ENST00000572365 V9GYY5 206 aaPredicted RBP5.41□□□□□ -1.54
SF3B3-214ENST00000572365 MDC1Q14676 2089 aaKnown RBP5.4□□□□□ -1.54
SF3B3-214ENST00000572365 A0A1B0GTQ1 180 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 ARHGEF35A5YM69 484 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 C17orf100A8MU93 164 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 NEDD8-MDP1E9PL57 170 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 F5H0A9 414 aaPredicted RBP5.4□□□□□ -1.54
SF3B3-214ENST00000572365 CSO75390 466 aaKnown RBP5.4□□□□□ -1.54
SF3B3-214ENST00000572365 NOL4O94818 638 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 TMEM63AO94886 807 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms