RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 IQCHQ86VS3 1027 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ZDHHC21Q8IVQ6 265 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 HMGB4Q8WW32 186 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 NKD2Q969F2 451 aaPredicted RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ZBED6CLQ96FA7 236 aaPredicted RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 GFM1Q96RP9 751 aaKnown RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 SMURF2Q9HAU4 748 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 CCDC59Q9P031 241 aaKnown RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ZNF221Q9UK13 617 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 RUVBL1Q9Y265 456 aaKnown RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 SNX4O95219 450 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 RENP00797 406 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 SLC7A1P30825 629 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 CSKP41240 450 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ADAM8P78325 824 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 HNRNPDQ14103 355 aaKnown RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 EGFLAMQ63HQ2 1017 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 SGCDQ92629 289 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 CITED4Q96RK1 184 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 MOCS1Q9NZB8 636 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 MYCLP1P12525 358 aaPredicted RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ACVR2AP27037 513 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ECHS1P30084 290 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 CRTC2Q53ET0 693 aaPredicted RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 EIPR1Q53HC9 387 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 PRR23BQ6ZRT6 265 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 SAMD14Q8IZD0 417 aaPredicted RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 NUS1Q96E22 293 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 CENPNQ96H22 339 aaPredicted RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 CYP2S1Q96SQ9 504 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 TBX5Q99593 518 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 KXD1Q9BQD3 176 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ADAM7Q9H2U9 754 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 DNAJA2O60884 412 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 TULP3O75386 442 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 PRAMEF12O95522 483 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 TIE1P35590 1138 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ZMYND11Q15326 602 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 METTL21CQ5VZV1 264 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 P2RY8Q86VZ1 359 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 CARS2Q9HA77 564 aaKnown RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ANKHQ9HCJ1 492 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 UPB1Q9UBR1 384 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 MAFBQ9Y5Q3 323 aaPredicted RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ELOA3DA6NLF2 546 aaPredicted RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 B4DGG1 531 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 TRMUO75648 421 aaKnown RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 INHAP05111 366 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 GPIP06744 558 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ACP5P13686 325 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 CCNFP41002 786 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 CDKL1Q00532 357 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ELOA3BQ3SY89 546 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ADNP2Q6IQ32 1131 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 LINGO2Q7L985 606 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 SLC51AQ86UW1 340 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 FSTL5Q8N475 847 aaPredicted RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 DBF4BQ8NFT6 615 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 TSTD1Q8NFU3 115 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ELOA3Q8NG57 546 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 DNAJA4Q8WW22 397 aaPredicted RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 TFAP2BQ92481 460 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 NODALQ96S42 347 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 DUSP26Q9BV47 211 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ZNF180Q9UJW8 692 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 RAB26Q9ULW5 256 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 FKBP7Q9Y680 259 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 SEMA3DO95025 777 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 PRH1P02810 166 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 CHAF1BQ13112 559 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 CARD16Q5EG05 197 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 PITRM1Q5JRX3 1037 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 IDNKQ5T6J7 187 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 NAPRTQ6XQN6 538 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 RIT1Q92963 219 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 YIPF4Q9BSR8 244 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 GATA5Q9BWX5 397 aaPredicted RBP13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 MKKSQ9NPJ1 570 aaPredicted RBP13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 DAPL1A0PJW8 107 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 REM1O75628 298 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 ATP5A1P25705 553 aaKnown RBP13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 NRG3P56975 720 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 MTPNP58546 118 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 SCN1BQ07699 218 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 GANABQ14697 944 aaKnown RBP13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 FOXR2Q6PJQ5 311 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 ECHDC2Q86YB7 292 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 SUN3Q8TAQ9 357 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 SH3RF2Q8TEC5 729 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 SCLYQ96I15 445 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 ZFP3Q96NJ6 502 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 TRMT61BQ9BVS5 477 aaKnown RBP13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 TTYH1Q9H313 450 aaPredicted RBP13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 ETAA1Q9NY74 926 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 CLCA3PQ9Y6N3 262 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 SLIT3O75094 1523 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 A0A1W2PRU2 124 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 GLTPD2A6NH11 291 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 PITPNM1O00562 1244 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 NOBOXO60393 691 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms