RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-215	ENST00000565442	OLFML3	Q9NRN5	406 aa		4.17	□□□□□ -1.74
CHD9-215	ENST00000565442	TAAR2	Q9P1P5	351 aa		4.17	□□□□□ -1.74
CHD9-215	ENST00000565442	B3GAT1	Q9P2W7	334 aa		4.17	□□□□□ -1.74
CHD9-215	ENST00000565442		A0A1W2PRQ8	180 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	TBCA	O75347	108 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	ACSL3	O95573	720 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	SMIM18	P0DKX4	95 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	GLUL	P15104	373 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	MSH3	P20585	1137 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	MARK3	P27448	753 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	MAPK12	P53778	367 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	PPARD	Q03181	441 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	HYAL4	Q2M3T9	481 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	WBP2NL	Q6ICG8	309 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	MFSD12	Q6NUT3	480 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	SHQ1	Q6PI26	577 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	KRT77	Q7Z794	578 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	THNSL1	Q8IYQ7	743 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	RFLNB	Q8N5W9	214 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	PPFIBP2	Q8ND30	876 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	OR13J1	Q8NGT2	312 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	FGFBP3	Q8TAT2	258 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	ZNF473	Q8WTR7	871 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	SSMEM1	Q8WWF3	244 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	ATL1	Q8WXF7	558 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	STAMBPL1	Q96FJ0	436 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	ST6GAL2	Q96JF0	529 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	MYADM	Q96S97	322 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	PSD2	Q9BQI7	771 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	SLC25A23	Q9BV35	468 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	EDEM3	Q9BZQ6	932 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	TFB2M	Q9H5Q4	396 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	ZNF556	Q9HAH1	456 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442		Q9N2K0	584 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	SH3GLB2	Q9NR46	395 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	MRGBP	Q9NV56	204 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	CPSF3	Q9UKF6	684 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	ABT1	Q9ULW3	272 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	NME7	Q9Y5B8	376 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	LIPG	Q9Y5X9	500 aa		4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	SOS1	Q07889	1333 aa	Predicted RBP	4.16	□□□□□ -1.74
CHD9-215	ENST00000565442	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442		A0A1W2PPQ1	181 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442		A0A1W2PRB8	838 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	OR6C76	A6NM76	312 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	PRR32	B1ATL7	298 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442		E9PI62	339 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	GAPDHS	O14556	408 aa	Predicted RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	PTGES	O14684	152 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	RECQL5	O94762	991 aa	Predicted RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	WDPCP	O95876	746 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	PLG	P00747	810 aa	Predicted RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	CRYAA	P02489	173 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	NR3C1	P04150	777 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	ATP5B	P06576	529 aa	Known RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	F7	P08709	466 aa	Predicted RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	NPY4R	P50391	375 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	GAS1	P54826	345 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	CX3CL1	P78423	397 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	RPL36A	P83881	106 aa	Known RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	POU3F1	Q03052	451 aa	Predicted RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	MZT1	Q08AG7	82 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	ARL16	Q0P5N6	197 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	PPIG	Q13427	754 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	ZNF718	Q3SXZ3	478 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	ZNF672	Q499Z4	452 aa	Predicted RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	PHLDA2	Q53GA4	152 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	FAM76B	Q5HYJ3	339 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	LINGO4	Q6UY18	593 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	ERN2	Q76MJ5	926 aa	Known RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	NUP54	Q7Z3B4	507 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	ARHGAP22	Q7Z5H3	698 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	ADCK2	Q7Z695	626 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	NFE4	Q86UQ8	179 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	CCAR2	Q8N163	923 aa	Known RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	TRIML1	Q8N9V2	468 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	ROBO4	Q8WZ75	1007 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	SPSB1	Q96BD6	273 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	ALG14	Q96F25	216 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	OTUB1	Q96FW1	271 aa	Predicted RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	SPATA17	Q96L03	361 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	SGK494	Q96LW2	274 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	GBP5	Q96PP8	586 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	TRMT61B	Q9BVS5	477 aa	Known RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	S1PR5	Q9H228	398 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	ARRDC1-AS1	Q9H2J1	176 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	PFDN4	Q9NQP4	134 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	SERINC1	Q9NRX5	453 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	ZFP57	Q9NU63	452 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	MTUS1	Q9ULD2	1270 aa		4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	GREB1L	Q9C091	1923 aa	Predicted RBP	4.15	□□□□□ -1.75
CHD9-215	ENST00000565442	NEMP2	A6NFY4	417 aa		4.14	□□□□□ -1.75
CHD9-215	ENST00000565442	IGHV2-70	P01814	119 aa		4.14	□□□□□ -1.75
CHD9-215	ENST00000565442	JAK1	P23458	1154 aa		4.14	□□□□□ -1.75
CHD9-215	ENST00000565442	EEF1B2	P24534	225 aa	Known RBP	4.14	□□□□□ -1.75
CHD9-215	ENST00000565442	CDH11	P55287	796 aa		4.14	□□□□□ -1.75
CHD9-215	ENST00000565442	KRTAP10-12	P60413	245 aa		4.14	□□□□□ -1.75
CHD9-215	ENST00000565442	POLR2L	P62875	67 aa	Known RBP	4.14	□□□□□ -1.75
CHD9-215	ENST00000565442	ROR1	Q01973	937 aa		4.14	□□□□□ -1.75

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