RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 MT-ND3P03897 115 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 MPOP05164 745 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ITGA2BP08514 1039 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ANXA5P08758 320 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ABHD2P08910 425 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ENO2P09104 434 aaPredicted RBP10.41□□□□□ -0.74
TPM1-229ENST00000561242 BRAFP15056 766 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 CD9P21926 228 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 CCND1P24385 295 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 MPSTP25325 297 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 TNFRSF8P28908 595 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 CD1CP29017 333 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 MLLT3P42568 568 aaPredicted RBP10.41□□□□□ -0.74
TPM1-229ENST00000561242 ABCG1P45844 678 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 CAPZBP47756 277 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 SEPHS1P49903 392 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 LIMK2P53671 638 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 MAPK10P53779 464 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 GPX6P59796 221 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ACY1Q03154 408 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ARHGAP19Q14CB8 494 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ISXQ2M1V0 245 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ERCC6LQ2NKX8 1250 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ACSBG2Q5FVE4 666 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ZNF789Q5FWF6 425 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 C3orf38Q5JPI3 329 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 DCAF12Q5T6F0 453 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 DUS1LQ6P1R4 473 aaKnown RBP10.41□□□□□ -0.74
TPM1-229ENST00000561242 LRRC69Q6ZNQ3 347 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ZNF438Q7Z4V0 828 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ADCK2Q7Z695 626 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 RAB44Q7Z6P3 723 aaPredicted RBP10.41□□□□□ -0.74
TPM1-229ENST00000561242 ADAMTSL2Q86TH1 951 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 KMT5CQ86Y97 462 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 GPR135Q8IZ08 494 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 CARFQ8N187 725 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 LILRA3Q8N6C8 439 aaPredicted RBP10.41□□□□□ -0.74
TPM1-229ENST00000561242 DENND1AQ8TEH3 1009 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 EEF1AKMT1Q8WVE0 214 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 SREK1Q8WXA9 508 aaKnown RBP10.41□□□□□ -0.74
TPM1-229ENST00000561242 SMPDL3AQ92484 453 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 MED8Q96G25 268 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ASPSCR1Q9BZE9 553 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 XKR8Q9H6D3 395 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 CNOT10Q9H9A5 744 aaKnown RBP10.41□□□□□ -0.74
TPM1-229ENST00000561242 POLR1BQ9H9Y6 1135 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 THSD1Q9NS62 852 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 SLC39A1Q9NY26 324 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 RNF112Q9ULX5 631 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 LOXL2Q9Y4K0 774 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 ANGPTL3Q9Y5C1 460 aa10.41□□□□□ -0.74
TPM1-229ENST00000561242 PTPRZ1P23471 2315 aaPredicted RBP10.4□□□□□ -0.74
TPM1-229ENST00000561242 FAM149AA5PLN7 773 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 A6NCN8 305 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 TLCD2A6NGC4 264 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 SMIM23A6NLE4 172 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 EFCAB7A8K855 629 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 BHMG1C9JSJ3 638 aaPredicted RBP10.4□□□□□ -0.74
TPM1-229ENST00000561242 RASGRF2O14827 1237 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 PLD2O14939 933 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 POLR1CO15160 346 aaPredicted RBP10.4□□□□□ -0.74
TPM1-229ENST00000561242 RIPK2O43353 540 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 ZBTB11O95625 1053 aaPredicted RBP10.4□□□□□ -0.74
TPM1-229ENST00000561242 CCDC166P0CW27 439 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 TAC1P20366 129 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 ARL1P40616 181 aaPredicted RBP10.4□□□□□ -0.74
TPM1-229ENST00000561242 CLCN7P51798 805 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 AP1S2P56377 157 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 RAB15P59190 212 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 GABREP78334 506 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 SQSTM1Q13501 440 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 SLC29A2Q14542 456 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 NR1D2Q14995 579 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 ZC3H12BQ5HYM0 836 aaKnown RBP10.4□□□□□ -0.74
TPM1-229ENST00000561242 CAPN13Q6MZZ7 669 aaPredicted RBP10.4□□□□□ -0.74
TPM1-229ENST00000561242 WDR93Q6P2C0 686 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 CEACAM20Q6UY09 585 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 BPHLQ86WA6 291 aaPredicted RBP10.4□□□□□ -0.74
TPM1-229ENST00000561242 GPSM1Q86YR5 675 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 RASGRP3Q8IV61 690 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 AGGF1Q8N302 714 aaeCLIP10.4□□□□□ -0.74
TPM1-229ENST00000561242 TCAIMQ8N3R3 496 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 STAG3L4Q8TBR4 150 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 JPH3Q8WXH2 748 aaPredicted RBP10.4□□□□□ -0.74
TPM1-229ENST00000561242 ANKRD7Q92527 254 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 CCDC74BQ96LY2 380 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 PAFAH2Q99487 392 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 NUDT22Q9BRQ3 303 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 ZPBPQ9BS86 351 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 PARD6BQ9BYG5 372 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 NLNQ9BYT8 704 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 NRSN2Q9GZP1 204 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 STMN4Q9H169 189 aaPredicted RBP10.4□□□□□ -0.74
TPM1-229ENST00000561242 CCDC86Q9H6F5 360 aaKnown RBP10.4□□□□□ -0.74
TPM1-229ENST00000561242 SMYD2Q9NRG4 433 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 C1GALT1Q9NS00 363 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 ACTR10Q9NZ32 417 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 CD274Q9NZQ7 290 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 PSMC3IPQ9P2W1 217 aaPredicted RBP10.4□□□□□ -0.74
TPM1-229ENST00000561242 PISDQ9UG56 409 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms