RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 CD300LFQ8TDQ1 290 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 DQX1Q8TE96 717 aaKnown RBP13.73□□□□□ -0.21
SPG11-210ENST00000558319 ZNF670Q9BS34 389 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 UNC93B1Q9H1C4 597 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 POLR3BQ9NW08 1133 aaPredicted RBP13.73□□□□□ -0.21
SPG11-210ENST00000558319 PADI3Q9ULW8 664 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 PXDNQ92626 1479 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.73□□□□□ -0.21
SPG11-210ENST00000558319 CXCR6O00574 342 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 SSX5O60225 188 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 PAPSS2O95340 614 aaPredicted RBP13.73□□□□□ -0.21
SPG11-210ENST00000558319 IFNW1P05000 195 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 SRCP12931 536 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 CREB1P16220 341 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 KLHL26Q53HC5 615 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 C1orf94Q6P1W5 598 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 CMTR2Q8IYT2 770 aaKnown RBP13.73□□□□□ -0.21
SPG11-210ENST00000558319 SLC22A15Q8IZD6 547 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 INPP4AQ96PE3 977 aaPredicted RBP13.73□□□□□ -0.21
SPG11-210ENST00000558319 EBF2Q9HAK2 575 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 SPIN1Q9Y657 262 aaPredicted RBP13.73□□□□□ -0.21
SPG11-210ENST00000558319 IQGAP3Q86VI3 1631 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 TNFRSF10BO14763 440 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 ACOX3O15254 700 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 ZNF208O43345 1280 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 MSX1P28360 303 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 AVPR1BP47901 424 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 OC90Q02509 493 aaPredicted RBP13.73□□□□□ -0.21
SPG11-210ENST00000558319 LYPLAL1Q5VWZ2 237 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 NLGN2Q8NFZ4 835 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 MAFIPQ8WZ33 124 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 RHOJQ9H4E5 214 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 ST14Q9Y5Y6 855 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 NOMO3P69849 1222 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 RIN1Q13671 783 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 NOMO1Q15155 1222 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 KIAA1161Q6NSJ0 714 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 IRF2BP2Q7Z5L9 587 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 OR2L2Q8NH16 312 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 PCDH19Q8TAB3 1148 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 SMG9Q9H0W8 520 aaKnown RBP13.73□□□□□ -0.21
SPG11-210ENST00000558319 TMEM134Q9H6X4 195 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 ITM2CQ9NQX7 267 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 USP31Q70CQ4 1352 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 C13orf42A0A1B0GVH6 325 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 BTBD19C9JJ37 291 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 RNF225M0QZC1 329 aaPredicted RBP13.72□□□□□ -0.21
SPG11-210ENST00000558319 PIP5K1BO14986 540 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 GADD45GO95257 159 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 LMO2P25791 158 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 RGS8P57771 180 aaPredicted RBP13.72□□□□□ -0.21
SPG11-210ENST00000558319 S100A12P80511 92 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 TMEM220Q6QAJ8 160 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 BBS12Q6ZW61 710 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 RBFAQ8N0V3 343 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 EFHD2Q96C19 240 aaPredicted RBP13.72□□□□□ -0.21
SPG11-210ENST00000558319 RIPOR3Q96MK2 946 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 COMMD4Q9H0A8 199 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 ZNF700Q9H0M5 742 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 ABCB8Q9NUT2 735 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 GRIN2DO15399 1336 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 PPEF2O14830 753 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 REM1O75628 298 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 VNN2O95498 520 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 PTPN9P43378 593 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 RPP38P78345 283 aaKnown RBP13.72□□□□□ -0.21
SPG11-210ENST00000558319 GRM3Q14832 879 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 NPTX1Q15818 432 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 UBXN11Q5T124 520 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 QSOX2Q6ZRP7 698 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 GPALPP1Q8IXQ4 340 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 STOML3Q8TAV4 291 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 HERVK_113Q902F9 699 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 PCDHGC3Q9UN70 934 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 RLN2P04090 185 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 CYP3A5P20815 502 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 CD247P20963 164 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 NMBRP28336 390 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 LRRC38Q5VT99 294 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 ANKRD22Q5VYY1 191 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 HAGHLQ6PII5 290 aaPredicted RBP13.72□□□□□ -0.21
SPG11-210ENST00000558319 BRSK1Q8TDC3 778 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 COQ8BQ96D53 544 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 CPXM1Q96SM3 734 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 TMEM27Q9HBJ8 222 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 ATG13O75143 517 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 GATBO75879 557 aaKnown RBP13.72□□□□□ -0.21
SPG11-210ENST00000558319 GPIP06744 558 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 MERTKQ12866 999 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 SLC22A8Q8TCC7 542 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 PAK6Q9NQU5 681 aaPredicted RBP13.72□□□□□ -0.21
SPG11-210ENST00000558319 MAP2P11137 1827 aaKnown RBP13.72□□□□□ -0.21
SPG11-210ENST00000558319 TBX18O95935 607 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 SLC9B1Q4ZJI4 515 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 DNAJB7Q7Z6W7 309 aaPredicted RBP13.72□□□□□ -0.21
SPG11-210ENST00000558319 VSIG10LQ86VR7 867 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 MSL3Q8N5Y2 521 aaKnown RBP13.72□□□□□ -0.21
SPG11-210ENST00000558319 CNTD1Q8N815 330 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 RASGEF1AQ8N9B8 481 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 C7orf26Q96N11 449 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms