RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ZNF148Q9UQR1 794 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 PCDHGA9Q9Y5G4 932 aaKnown RBP14.16□□□□□ -0.14
SHMT2-235ENST00000557740 ZNF749O43361 778 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 OR1I1O60431 355 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 SUN1O94901 812 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 AGXTP21549 392 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 ACADLP28330 430 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 CDC25BP30305 580 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 PPARGP37231 505 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-235ENST00000557740 MLLT10P55197 1068 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 PRAMEP78395 509 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 NCF4Q15080 339 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 OASLQ15646 514 aaKnown RBP14.15□□□□□ -0.14
SHMT2-235ENST00000557740 TSTD2Q5T7W7 516 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 NAPRTQ6XQN6 538 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 NLRP9Q7RTR0 991 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 OR6P1Q8NGX9 317 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 OR5K2Q8NHB8 316 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 ADAMTS17Q8TE56 1095 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 MIB2Q96AX9 1013 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 TCTN2Q96GX1 697 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 RANBP9Q96S59 729 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 RAB6BQ9NRW1 208 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 IRAK4Q9NWZ3 460 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 OR6C2Q9NZP2 312 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 SLC2A6Q9UGQ3 507 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 RIMKLBQ9ULI2 386 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 GUCA1BQ9UMX6 200 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 PADI2Q9Y2J8 665 aa14.15□□□□□ -0.14
SHMT2-235ENST00000557740 A0A0J9YY10 115 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 SLC5A10A0PJK1 596 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 TTLL8A6PVC2 850 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 BHMG1C9JSJ3 638 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-235ENST00000557740 KRT86O43790 486 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 OR2B3O76000 313 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 TMEM63AO94886 807 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 ADRA1DP25100 572 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 CSE1LP55060 971 aaKnown RBP14.14□□□□□ -0.15
SHMT2-235ENST00000557740 SNX1Q13596 522 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 UBAP2LQ14157 1087 aaKnown RBP14.14□□□□□ -0.15
SHMT2-235ENST00000557740 DEFB110Q30KQ9 67 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 FASTKD1Q53R41 847 aaKnown RBP14.14□□□□□ -0.15
SHMT2-235ENST00000557740 AARS2Q5JTZ9 985 aaKnown RBP14.14□□□□□ -0.15
SHMT2-235ENST00000557740 FAM69BQ5VUD6 431 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 GAS2L3Q86XJ1 694 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 RAB43Q86YS6 212 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 SLC13A5Q86YT5 568 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-235ENST00000557740 EFCAB3Q8N7B9 438 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 PPHLN1Q8NEY8 458 aaKnown RBP14.14□□□□□ -0.15
SHMT2-235ENST00000557740 OR4L1Q8NH43 312 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 C1orf54Q8WWF1 131 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 COL26A1Q96A83 441 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 OR2A14Q96R47 310 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 C17orf62Q9BQA9 187 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 DHRS4Q9BTZ2 278 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 SPHK1Q9NYA1 384 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 ANKMY1Q9P2S6 941 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 PLAGL1Q9UM63 463 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 AP1M2Q9Y6Q5 423 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 DOPEY2Q9Y3R5 2298 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 NAV2Q8IVL1 2488 aa14.14□□□□□ -0.15
SHMT2-235ENST00000557740 RP1L1Q8IWN7 2480 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-235ENST00000557740 ISM1B1AKI9 464 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 RPN2P04844 631 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 CAPN1P07384 714 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 APRTP07741 180 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 GRIA1P42261 906 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 RRADP55042 308 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 ATP1A4Q13733 1029 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 KIR2DS3Q14952 304 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 TMED2Q15363 201 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 ZIC1Q15915 447 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 SLC5A12Q1EHB4 618 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 DNAJC21Q5F1R6 531 aaKnown RBP14.13□□□□□ -0.15
SHMT2-235ENST00000557740 TMEM102Q8N9M5 508 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-235ENST00000557740 UBE2Q2Q8WVN8 375 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 CHRNA10Q9GZZ6 450 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 FAM60AQ9NP50 221 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 CASS4Q9NQ75 786 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 PAK5Q9P286 719 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 GPN3Q9UHW5 284 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-235ENST00000557740 ANAPC5Q9UJX4 755 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 SRPK3Q9UPE1 567 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 TCAF1Q9Y4C2 921 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 ZNF451Q9Y4E5 1061 aa14.13□□□□□ -0.15
SHMT2-235ENST00000557740 ZSCAN9O15535 394 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-235ENST00000557740 APOA4P06727 396 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 ATXN8OSP0DMR3 200 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 PKLRP30613 574 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 CD97P48960 835 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 ACVR1Q04771 509 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 HSPA14Q0VDF9 509 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 RPS6KA1Q15418 735 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 C1orf189Q5VU69 101 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 PAPD7Q5XG87 772 aaKnown RBP14.12□□□□□ -0.15
SHMT2-235ENST00000557740 MED25Q71SY5 747 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 ZNF534Q76KX8 674 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 PRUNE1Q86TP1 453 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 SLC22A15Q8IZD6 547 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 FAM26EQ8N5C1 309 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms