RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SLC5A12Q1EHB4 618 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 KIAA0930Q6ICG6 404 aaPredicted RBP11.46□□□□□ -0.57
VRK1-204ENST00000555351 UNC5AQ6ZN44 842 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 SDCCAG8Q86SQ7 713 aaPredicted RBP11.46□□□□□ -0.57
VRK1-204ENST00000555351 HOOK3Q86VS8 718 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 MCUQ8NE86 351 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 CT55Q8WUE5 264 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 SLC22A18Q96BI1 424 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 RAB11FIP5Q9BXF6 653 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 P2RY12Q9H244 342 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 XAB2Q9HCS7 855 aaKnown RBP11.46□□□□□ -0.57
VRK1-204ENST00000555351 POLHQ9Y253 713 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 VPS9D1Q9Y2B5 631 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 HEMK1Q9Y5R4 338 aaPredicted RBP11.46□□□□□ -0.57
VRK1-204ENST00000555351 HELZ2Q9BYK8 2649 aaKnown RBP11.45□□□□□ -0.58
VRK1-204ENST00000555351 A0A0J9YY10 115 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 PGRMC1O00264 195 aaKnown RBP11.45□□□□□ -0.58
VRK1-204ENST00000555351 NDUFS3O75489 264 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 KRT14P02533 472 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 NTRK1P04629 796 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 CHRM5P08912 532 aaPredicted RBP11.45□□□□□ -0.58
VRK1-204ENST00000555351 PRKAR1AP10644 381 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 ST6GAL1P15907 406 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 UGT2B7P16662 529 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 OGNP20774 298 aaKnown RBP11.45□□□□□ -0.58
VRK1-204ENST00000555351 NMBRP28336 390 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 ATP5DP30049 168 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 RORAP35398 523 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 ARCN1P48444 511 aaKnown RBP11.45□□□□□ -0.58
VRK1-204ENST00000555351 RAB28P51157 221 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 ITGA1P56199 1179 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 RPS15P62841 145 aaKnown RBP11.45□□□□□ -0.58
VRK1-204ENST00000555351 HSPA14Q0VDF9 509 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 NFATC3Q12968 1075 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 TYSND1Q2T9J0 566 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 ZNF789Q5FWF6 425 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 PLEKHS1Q5SXH7 462 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 PTRHD1Q6GMV3 140 aaKnown RBP11.45□□□□□ -0.58
VRK1-204ENST00000555351 MICALCLQ6ZW33 695 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 SYVN1Q86TM6 617 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 APLFQ8IW19 511 aaPredicted RBP11.45□□□□□ -0.58
VRK1-204ENST00000555351 DCUN1D3Q8IWE4 304 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 DSELQ8IZU8 1212 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 FLVCR1-AS1Q8TAF5 88 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 ACTRT1Q8TDG2 376 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 GRK7Q8WTQ7 553 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 THAP4Q8WY91 577 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 MAGOHBQ96A72 148 aaKnown RBP11.45□□□□□ -0.58
VRK1-204ENST00000555351 PPM1MQ96MI6 270 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 OR2A14Q96R47 310 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 C17orf62Q9BQA9 187 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 GRPEL1Q9HAV7 217 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 ENAMQ9NRM1 1142 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 MARCH4Q9P2E8 410 aaPredicted RBP11.45□□□□□ -0.58
VRK1-204ENST00000555351 NEU2Q9Y3R4 380 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 KCNMB2Q9Y691 235 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 AP1M2Q9Y6Q5 423 aa11.45□□□□□ -0.58
VRK1-204ENST00000555351 FAM237BA0A1B0GVD1 139 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 MEN1O00255 615 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 SUV39H1O43463 412 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 KATNA1O75449 491 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 VAPBO95292 243 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 ESR1P03372 595 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 CD63P08962 238 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 TPBGLP0DKB5 382 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 CYP2A7P20853 494 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 MGAT1P26572 445 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 ARNTP27540 789 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 PKLRP30613 574 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 CCNFP41002 786 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 FNTAP49354 379 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 CRADDP78560 199 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 GPS1Q13098 491 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 GPS2Q13227 327 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 BRD3Q15059 726 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 UGT8Q16880 541 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 DEFB109BQ30KR1 87 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 TTC27Q6P3X3 843 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 TTC23LQ6PF05 361 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 ATG14Q6ZNE5 492 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 OTOAQ7RTW8 1153 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 CAND1Q86VP6 1230 aaKnown RBP11.44□□□□□ -0.58
VRK1-204ENST00000555351 REXO1L1PQ8IX06 675 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 LMNTD2Q8IXW0 634 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 GPR135Q8IZ08 494 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 C19orf47Q8N9M1 422 aaKnown RBP11.44□□□□□ -0.58
VRK1-204ENST00000555351 OR1L3Q8NH93 324 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 GSDMBQ8TAX9 411 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 MFSD3Q96ES6 412 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 MENTQ9BUN1 341 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 NLNQ9BYT8 704 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 ACTL8Q9H568 366 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 XKR8Q9H6D3 395 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 ACTR5Q9H9F9 607 aaPredicted RBP11.44□□□□□ -0.58
VRK1-204ENST00000555351 INTS10Q9NVR2 710 aaKnown RBP11.44□□□□□ -0.58
VRK1-204ENST00000555351 SYBUQ9NX95 663 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 KLHL42Q9P2K6 505 aa11.44□□□□□ -0.58
VRK1-204ENST00000555351 FARSAQ9Y285 508 aaKnown RBP11.44□□□□□ -0.58
VRK1-204ENST00000555351 TDRKHQ9Y2W6 561 aaKnown RBP11.44□□□□□ -0.58
VRK1-204ENST00000555351 MRPS18BQ9Y676 258 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms