RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CHCHD4Q8N4Q1 142 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 NIPA2Q8N8Q9 360 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 PNPLA1Q8N8W4 532 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 Q8NA96 180 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 DENND6BQ8NEG7 585 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SAP25Q8TEE9 199 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SETD7Q8WTS6 366 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 RAB7BQ96AH8 199 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SKA1Q96BD8 255 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 IQCDQ96DY2 449 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF764Q96H86 408 aaPredicted RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 FBXL20Q96IG2 436 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 CELF6Q96J87 481 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 LRIG1Q96JA1 1093 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 NSMCE3Q96MG7 304 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 GDAP1L1Q96MZ0 367 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 DMRTA2Q96SC8 542 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 KLF6Q99612 283 aaPredicted RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 NUP85Q9BW27 656 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SCNM1Q9BWG6 230 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 KRTAP17-1Q9BYP8 105 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ASPSCR1Q9BZE9 553 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 XPO4Q9C0E2 1151 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SLC39A8Q9C0K1 460 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 THAP2Q9H0W7 228 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ERVMER34-1Q9H9K5 563 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 MRPL47Q9HD33 250 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 PCDH12Q9NPG4 1184 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 DYRK4Q9NR20 520 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 CWC15Q9P013 229 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 CTTNBP2NLQ9P2B4 639 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 MYO1AQ9UBC5 1043 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 DKK3Q9UBP4 350 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 UBA2Q9UBT2 640 aaPredicted RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 PCSK1NQ9UHG2 260 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ITM2BQ9Y287 266 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 BZW2Q9Y6E2 419 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SCINQ9Y6U3 715 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 LRP4O75096 1905 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 CFAP47Q6ZTR5 3102 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 LAMA5O15230 3695 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 RP1P56715 2156 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ZFHX4Q86UP3 3567 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 COL27A1Q8IZC6 1860 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 PRAMEF33A0A0G2JMD5 474 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 POM121BA6NF01 834 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 IGLON5A6NGN9 336 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ARHGAP42A6NI28 874 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 A6NNZ2 444 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF785A8K8V0 405 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 F2RL2O00254 374 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 YY2O15391 372 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 TNFSF14O43557 240 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 TSPAN6O43657 245 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 MFSD11O43934 449 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 PRPSAP2O60256 369 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 MAGEC1O60732 1142 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 PRAMEF10O60809 474 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 SDC3O75056 442 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ZRANB2O95218 330 aaKnown RBP eCLIP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 POP4O95707 220 aaKnown RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 CHRM2P08172 466 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 THEGLP0DJG4 465 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 GIMD1P0DJR0 217 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF37AP17032 561 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 DESP17661 470 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 CHRM3P20309 590 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 GATA3P23771 443 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 AKT2P31751 481 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 CASP14P31944 242 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 HCAR3P49019 387 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ACADVLP49748 655 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 PAPOLAP51003 745 aaKnown RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ARSEP51690 589 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ADKP55263 362 aaKnown RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 TAS2R40P59535 323 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 PFN3P60673 137 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 RPS7P62081 194 aaKnown RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 RPS21P63220 83 aaKnown RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 CCDC15Q0P6D6 951 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 RALGDSQ12967 914 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 PIGHQ14442 188 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ASTE1Q2TB18 679 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 PPP6R3Q5H9R7 873 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF362Q5T0B9 420 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ALKBH5Q6P6C2 394 aaKnown RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 GDPD4Q6W3E5 623 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 CCNI2Q6ZMN8 369 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 Q6ZSR6 202 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 PTAR1Q7Z6K3 402 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 TTC7BQ86TV6 843 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF354CQ86Y25 554 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 VSTM4Q8IW00 320 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 LNX2Q8N448 690 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 EID2Q8N6I1 236 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 IL17RDQ8NFM7 739 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF564Q8TBZ8 553 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 FAM71BQ8TC56 605 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 TEKT4Q8WW24 435 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ASB12Q8WXK4 309 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms