RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 ATP6V1C1P21283 382 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 NFKBIAP25963 317 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 P2RY2P41231 377 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 NFYCQ13952 458 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 RCAN2Q14206 197 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 PDGFRLQ15198 375 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 C6orf10Q5SRN2 563 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 CRTC3Q6UUV7 619 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 TMIEQ8NEW7 156 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 UBTD2Q8WUN7 234 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 NUS1Q96E22 293 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 MED8Q96G25 268 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 GPATCH1Q9BRR8 931 aaKnown RBP20.44■□□□□ 0.86
PRDM4-205ENST00000550376 NTMT1Q9BV86 223 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 BRINP2Q9C0B6 783 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 DYRK4Q9NR20 520 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 MRGBPQ9NV56 204 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 MSRAQ9UJ68 235 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 DOCK9Q9BZ29 2069 aa20.44■□□□□ 0.86
PRDM4-205ENST00000550376 A0A1W2PP18 115 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 SLC6A2P23975 617 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 SFT2D3Q587I9 215 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 LDLRAP1Q5SW96 308 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 CHPFQ8IZ52 775 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 KRTCAP2Q8N6L1 136 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 N4BP2L2Q92802 583 aaPredicted RBP20.43■□□□□ 0.86
PRDM4-205ENST00000550376 ASB9Q96DX5 294 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 KIF26AQ9ULI4 1882 aaPredicted RBP20.43■□□□□ 0.86
PRDM4-205ENST00000550376 LRRK1Q38SD2 2015 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 PABPN1LA6NDY0 278 aaKnown RBP20.43■□□□□ 0.86
PRDM4-205ENST00000550376 ATG13O75143 517 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 EBLN1P0CF75 366 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 FCHO2Q0JRZ9 810 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 CDC16Q13042 620 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 TSTA3Q13630 321 aaPredicted RBP20.43■□□□□ 0.86
PRDM4-205ENST00000550376 IMPG1Q17R60 797 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 DOK6Q6PKX4 331 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 SPDYE1Q8NFV5 336 aaPredicted RBP20.43■□□□□ 0.86
PRDM4-205ENST00000550376 UCMAQ8WVF2 138 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 ZNF184Q99676 751 aaPredicted RBP20.43■□□□□ 0.86
PRDM4-205ENST00000550376 CCM2Q9BSQ5 444 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 KLHL42Q9P2K6 505 aa20.43■□□□□ 0.86
PRDM4-205ENST00000550376 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.42■□□□□ 0.86
PRDM4-205ENST00000550376 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.42■□□□□ 0.86
PRDM4-205ENST00000550376 CYP2A7P20853 494 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 VASPP50552 380 aaPredicted RBP20.42■□□□□ 0.86
PRDM4-205ENST00000550376 PFN3P60673 137 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 EMX2Q04743 252 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 ERN2Q76MJ5 926 aaKnown RBP20.42■□□□□ 0.86
PRDM4-205ENST00000550376 NRTNQ99748 197 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 ACPTQ9BZG2 426 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 PFDN4Q9NQP4 134 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 ATXN10Q9UBB4 475 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 PLXNA2O75051 1894 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 PRR23AA6NEV1 266 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 PSMC3P17980 439 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 HALP42357 657 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 EIF4HQ15056 248 aaKnown RBP20.42■□□□□ 0.86
PRDM4-205ENST00000550376 ANKRD54Q6NXT1 300 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 CPA6Q8N4T0 437 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 HCAR2Q8TDS4 363 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 KLK6Q92876 244 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 TIFAQ96CG3 184 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 VPS35Q96QK1 796 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 TRPV4Q9HBA0 871 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 SERGEFQ9UGK8 458 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 NUMA1Q14980 2115 aa20.42■□□□□ 0.86
PRDM4-205ENST00000550376 MID1O15344 667 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 AP2A2O94973 939 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 MPC1LP0DKB6 136 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 SLC6A12P48065 614 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 PRLHRP49683 370 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 NAE1Q13564 534 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 TLR1Q15399 786 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 MAP7D1Q3KQU3 841 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 GRAMD1BQ3KR37 738 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 ADNP2Q6IQ32 1131 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 ADGRG6Q86SQ4 1221 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 KIAA2013Q8IYS2 634 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 LIX1Q8N485 282 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 SELENOMQ8WWX9 145 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 ROPN1LQ96C74 230 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 MRPL38Q96DV4 380 aaKnown RBP20.41■□□□□ 0.86
PRDM4-205ENST00000550376 PKP2Q99959 881 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 SEMA6AQ9H2E6 1030 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 BBIP1A8MTZ0 92 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 RNASEH2AO75792 299 aaKnown RBP20.41■□□□□ 0.86
PRDM4-205ENST00000550376 SLC16A8O95907 504 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 MAP4P27816 1152 aaKnown RBP20.41■□□□□ 0.86
PRDM4-205ENST00000550376 SF1Q15637 639 aaKnown RBP20.41■□□□□ 0.86
PRDM4-205ENST00000550376 PDCD4Q53EL6 469 aaKnown RBP20.41■□□□□ 0.86
PRDM4-205ENST00000550376 SAMD4BQ5PRF9 694 aaKnown RBP20.41■□□□□ 0.86
PRDM4-205ENST00000550376 SUSD1Q6UWL2 747 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.41■□□□□ 0.86
PRDM4-205ENST00000550376 PQLC1Q8N2U9 271 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 PPM1MQ96MI6 270 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 ECSITQ9BQ95 431 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 THAP10Q9P2Z0 257 aaPredicted RBP20.41■□□□□ 0.86
PRDM4-205ENST00000550376 IGLON5A6NGN9 336 aa20.41■□□□□ 0.86
PRDM4-205ENST00000550376 ANKRD28O15084 1053 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms