RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 SUCOQ9UBS9 1254 aaKnown RBP15.95■□□□□ 0.14
CUX1-213ENST00000549414 MAGEB17A8MXT2 336 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 WNT9AO14904 365 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 TEX28O15482 410 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 FADS2O95864 444 aaKnown RBP15.95■□□□□ 0.14
CUX1-213ENST00000549414 CCNA2P20248 432 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 HNF1BP35680 557 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 RPL3P39023 403 aaKnown RBP15.95■□□□□ 0.14
CUX1-213ENST00000549414 SLC26A3P40879 764 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 CCR4P51679 360 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 RHDQ02161 417 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 LMAN2Q12907 356 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 LAPTM5Q13571 262 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 DPY19L3Q6ZPD9 716 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 HIPK1Q86Z02 1210 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 BEND7Q8N7W2 519 aaPredicted RBP15.95■□□□□ 0.14
CUX1-213ENST00000549414 ENDOVQ8N8Q3 282 aaKnown RBP15.95■□□□□ 0.14
CUX1-213ENST00000549414 UTP4Q969X6 686 aaKnown RBP15.95■□□□□ 0.14
CUX1-213ENST00000549414 ZDHHC4Q9NPG8 344 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 KLHL3Q9UH77 587 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 GTF2A1LQ9UNN4 478 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 PCDHGA11Q9Y5H2 935 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 A0A1W2PP18 115 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 MYL12BO14950 172 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 GPR39O43194 453 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 GUCY1B2O75343 617 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 BCAS2O75934 225 aaPredicted RBP15.95■□□□□ 0.14
CUX1-213ENST00000549414 PRKD3O94806 890 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 APODP05090 189 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 HSPB3Q12988 150 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 TRAF3Q13114 568 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 TAS1R1Q7RTX1 841 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 APCDD1Q8J025 514 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 OR52B6Q8NGF0 335 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 GULP1Q9UBP9 304 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 RPS6KB2Q9UBS0 482 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 DGKBQ9Y6T7 804 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 NUP205Q92621 2012 aa15.95■□□□□ 0.14
CUX1-213ENST00000549414 CACNB4O00305 520 aaPredicted RBP15.94■□□□□ 0.14
CUX1-213ENST00000549414 BCKDKO14874 412 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 UMPSP11172 480 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 ASMTP46597 345 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 DGUOKQ16854 277 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 AURKBQ96GD4 344 aaPredicted RBP15.94■□□□□ 0.14
CUX1-213ENST00000549414 SLC32A1Q9H598 525 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 AMBNQ9NP70 447 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 ADAMTS6Q9UKP5 1117 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 OR1F1O43749 312 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 PGLSO95336 258 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 ASLP04424 464 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 BDKRB1P46663 353 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 RXRGP48443 463 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 NFATC2Q13469 925 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 C6orf136Q5SQH8 315 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 ZNF648Q5T619 568 aaPredicted RBP15.94■□□□□ 0.14
CUX1-213ENST00000549414 C9orf64Q5T6V5 341 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 SYVN1Q86TM6 617 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 NXPE1Q8N323 547 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 C11orf65Q8NCR3 313 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 CORO2BQ9UQ03 480 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 SQORQ9Y6N5 450 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 APC2O95996 2303 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 PNMA8CA0A1B0GUJ8 204 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 FGF19O95750 216 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 STATHP02808 62 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 MAPK12P53778 367 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 C1QTNF8P60827 252 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 PDE12Q6L8Q7 609 aaKnown RBP15.94■□□□□ 0.14
CUX1-213ENST00000549414 ISCA2Q86U28 154 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 ARMC8Q8IUR7 673 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 MTERF3Q96E29 417 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 WDR83Q9BRX9 315 aaKnown RBP15.94■□□□□ 0.14
CUX1-213ENST00000549414 UPK3BL1B0FP48 263 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 UPK3BL2E5RIL1 263 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 DIRAS1O95057 198 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 SCELO95171 688 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 MYL12AP19105 171 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 PPIBP23284 216 aaKnown RBP15.94■□□□□ 0.14
CUX1-213ENST00000549414 FRG2Q64ET8 278 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 FAM81AQ8TBF8 368 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 FRG2BQ96QU4 278 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 SORT1Q99523 831 aa15.94■□□□□ 0.14
CUX1-213ENST00000549414 AQP12BA6NM10 295 aa15.93■□□□□ 0.14
CUX1-213ENST00000549414 ADAM12O43184 909 aa15.93■□□□□ 0.14
CUX1-213ENST00000549414 DYRK3O43781 588 aa15.93■□□□□ 0.14
CUX1-213ENST00000549414 RFPL2O75678 378 aa15.93■□□□□ 0.14
CUX1-213ENST00000549414 OPN1SWP03999 348 aa15.93■□□□□ 0.14
CUX1-213ENST00000549414 ATP1B2P14415 290 aaPredicted RBP15.93■□□□□ 0.14
CUX1-213ENST00000549414 SH3BP2P78314 561 aa15.93■□□□□ 0.14
CUX1-213ENST00000549414 TRAP1Q12931 704 aaKnown RBP15.93■□□□□ 0.14
CUX1-213ENST00000549414 TOP3AQ13472 1001 aaPredicted RBP15.93■□□□□ 0.14
CUX1-213ENST00000549414 COL9A2Q14055 689 aaPredicted RBP15.93■□□□□ 0.14
CUX1-213ENST00000549414 CCNIQ14094 377 aa15.93■□□□□ 0.14
CUX1-213ENST00000549414 UBXN2BQ14CS0 331 aa15.93■□□□□ 0.14
CUX1-213ENST00000549414 RFX4Q33E94 735 aa15.93■□□□□ 0.14
CUX1-213ENST00000549414 AQP12AQ8IXF9 295 aa15.93■□□□□ 0.14
CUX1-213ENST00000549414 CDK20Q8IZL9 346 aa15.93■□□□□ 0.14
CUX1-213ENST00000549414 C1orf52Q8N6N3 182 aaKnown RBP15.93■□□□□ 0.14
CUX1-213ENST00000549414 KDM1BQ8NB78 822 aa15.93■□□□□ 0.14
CUX1-213ENST00000549414 DUSP26Q9BV47 211 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms