RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 DNASE1L3Q13609 305 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 DNAJC21Q5F1R6 531 aaKnown RBP12.75□□□□□ -0.37
CIT-214ENST00000544588 MRNIPQ6NTE8 343 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 TTC23LQ6PF05 361 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 PRICKLE2Q7Z3G6 844 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 VRK3Q8IV63 474 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 ADGRF3Q8IZF5 1079 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 C2orf73Q8N5S3 287 aaPredicted RBP12.75□□□□□ -0.37
CIT-214ENST00000544588 OR8K5Q8NH50 307 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 OR5K2Q8NHB8 316 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 COG1Q8WTW3 980 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 CT55Q8WUE5 264 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 ZNF501Q96CX3 271 aaPredicted RBP12.75□□□□□ -0.37
CIT-214ENST00000544588 CLIP3Q96DZ5 547 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 OSBPL9Q96SU4 736 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 KIFC1Q9BW19 673 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 TWSG1Q9GZX9 223 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 AKIRIN1Q9H9L7 192 aaPredicted RBP12.75□□□□□ -0.37
CIT-214ENST00000544588 TSR3Q9UJK0 312 aaKnown RBP12.75□□□□□ -0.37
CIT-214ENST00000544588 SLC39A10Q9ULF5 831 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 BTRCQ9Y297 605 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 FLNBO75369 2602 aaKnown RBP12.75□□□□□ -0.37
CIT-214ENST00000544588 IGSF10Q6WRI0 2623 aa12.75□□□□□ -0.37
CIT-214ENST00000544588 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.74□□□□□ -0.37
CIT-214ENST00000544588 RPN2P04844 631 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 CHRM5P08912 532 aaPredicted RBP12.74□□□□□ -0.37
CIT-214ENST00000544588 OAS2P29728 719 aaKnown RBP12.74□□□□□ -0.37
CIT-214ENST00000544588 POLE2P56282 527 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 RPS15P62841 145 aaKnown RBP12.74□□□□□ -0.37
CIT-214ENST00000544588 NFKB2Q00653 900 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 THOC5Q13769 683 aaKnown RBP12.74□□□□□ -0.37
CIT-214ENST00000544588 PPP1R7Q15435 360 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 ANKRD22Q5VYY1 191 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 SPESP1Q6UW49 350 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 OTOAQ7RTW8 1153 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 TAX1BP1Q86VP1 789 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 MPP5Q8N3R9 675 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 APOBEC4Q8WW27 367 aaKnown RBP12.74□□□□□ -0.37
CIT-214ENST00000544588 CPT1BQ92523 772 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 FAM136AQ96C01 138 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 TRAPPC9Q96Q05 1148 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 MRM3Q9HC36 420 aaKnown RBP12.74□□□□□ -0.37
CIT-214ENST00000544588 SYTL2Q9HCH5 934 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 GEMIN8Q9NWZ8 242 aaKnown RBP12.74□□□□□ -0.37
CIT-214ENST00000544588 SPHK1Q9NYA1 384 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 OR6C2Q9NZP2 312 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 SOX13Q9UN79 622 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 CRYL1Q9Y2S2 319 aa12.74□□□□□ -0.37
CIT-214ENST00000544588 CTAGE9A4FU28 777 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 SDR42E2A6NKP2 422 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 C21orf140B9A014 251 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 E7EQ34 232 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 ZNF185O15231 689 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 SLC28A2O43868 658 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 CREG1O75629 220 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 PLA2G2AP14555 144 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 UGT2B7P16662 529 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 CHRM3P20309 590 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 AOAHP28039 575 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 KCNAB2Q13303 367 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 DHX34Q14147 1143 aaKnown RBP12.73□□□□□ -0.37
CIT-214ENST00000544588 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 CDHR3Q6ZTQ4 885 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 LRRC6Q86X45 466 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 PTRH1Q86Y79 214 aaKnown RBP12.73□□□□□ -0.37
CIT-214ENST00000544588 FAM20CQ8IXL6 584 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 GPR135Q8IZ08 494 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 SLC22A15Q8IZD6 547 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 LMNTD1Q8N9Z9 388 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 OR1L3Q8NH93 324 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 GRK7Q8WTQ7 553 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 ZNF669Q96BR6 464 aaPredicted RBP12.73□□□□□ -0.37
CIT-214ENST00000544588 FOPNLQ96NB1 174 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 IL17FQ96PD4 163 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 OR2A14Q96R47 310 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 RUFY1Q96T51 708 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 SLC25A18Q9H1K4 315 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 KCNF1Q9H3M0 494 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 ACTR5Q9H9F9 607 aaPredicted RBP12.73□□□□□ -0.37
CIT-214ENST00000544588 ZNF71Q9NQZ8 489 aaPredicted RBP12.73□□□□□ -0.37
CIT-214ENST00000544588 IL1RAPL1Q9NZN1 696 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.73□□□□□ -0.37
CIT-214ENST00000544588 FARSAQ9Y285 508 aaKnown RBP12.73□□□□□ -0.37
CIT-214ENST00000544588 MAD1L1Q9Y6D9 718 aa12.73□□□□□ -0.37
CIT-214ENST00000544588 MGAQ8IWI9 3026 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 BPTFQ12830 3046 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 MAGEB16A2A368 324 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 E5RI56 91 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 PYCARD-AS1I3L0S3 204 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 MEN1O00255 615 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 KPNA5O15131 536 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 PHF2O75151 1096 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 GPC4O75487 556 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 TMEM63AO94886 807 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 TPBGLP0DKB5 382 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 RPS3P23396 243 aaKnown RBP eCLIP12.72□□□□□ -0.37
CIT-214ENST00000544588 ARNTP27540 789 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 RAB28P51157 221 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 ITGA1P56199 1179 aa12.72□□□□□ -0.37
CIT-214ENST00000544588 RPS18P62269 152 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms