RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 SOX1O00570 391 aaPredicted RBP13.34□□□□□ -0.27
HCFC2-202ENST00000544223 POP7O75817 140 aaKnown RBP13.34□□□□□ -0.27
HCFC2-202ENST00000544223 SLCO2B1O94956 709 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 FTH1P02794 183 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 LBPP18428 481 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 XRCC1P18887 633 aaPredicted RBP13.34□□□□□ -0.27
HCFC2-202ENST00000544223 IL12AP29459 219 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 CEACAM7Q14002 265 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 PTGR1Q14914 329 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 RPS6KA2Q15349 733 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 XKR7Q5GH72 579 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 SUSD1Q6UWL2 747 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 DSG4Q86SJ6 1040 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 HCAR2Q8TDS4 363 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 IL17FQ96PD4 163 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 ASB2Q96Q27 587 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 ADA2Q9NZK5 511 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 ZNF490Q9ULM2 529 aaPredicted RBP13.34□□□□□ -0.27
HCFC2-202ENST00000544223 POLR3HQ9Y535 204 aaPredicted RBP13.34□□□□□ -0.27
HCFC2-202ENST00000544223 TNPO3Q9Y5L0 923 aaKnown RBP13.34□□□□□ -0.27
HCFC2-202ENST00000544223 CROCCQ5TZA2 2017 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 SLC5A10A0PJK1 596 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 E7ENX8 843 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 H0Y8X5 98 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 OTCP00480 354 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 G6PDP11413 515 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 NFKBIAP25963 317 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 PFN3P60673 137 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 PPP2CBP62714 309 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 PPP2CAP67775 309 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 MS4A2Q01362 244 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 RIPK1Q13546 671 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 CAMK2GQ13555 558 aaPredicted RBP13.34□□□□□ -0.27
HCFC2-202ENST00000544223 NAE1Q13564 534 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 DDX39BQ13838 428 aaKnown RBP13.34□□□□□ -0.27
HCFC2-202ENST00000544223 PLEKHS1Q5SXH7 462 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 DUS1LQ6P1R4 473 aaKnown RBP13.34□□□□□ -0.27
HCFC2-202ENST00000544223 PNCKQ6P2M8 343 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 PKP4Q99569 1192 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 HDAC8Q9BY41 377 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 PCDHAC1Q9H158 963 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 PRM3Q9NNZ6 103 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 C2orf42Q9NWW7 574 aa13.34□□□□□ -0.27
HCFC2-202ENST00000544223 H3BM21 787 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 CHEK2O96017 543 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 B3GALT4O96024 378 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 PDYNP01213 254 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 CBSLP0DN79 551 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 HOXB2P14652 356 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 CD22P20273 847 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 CBSP35520 551 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 MTHFRP42898 656 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 RAP1GDS1P52306 607 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 RPL38P63173 70 aaKnown RBP13.33□□□□□ -0.28
HCFC2-202ENST00000544223 IRF4Q15306 451 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 CCDC6Q16204 474 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 AP5B1Q2VPB7 878 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 TMEM52BQ4KMG9 183 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 C11orf96Q7Z7L8 435 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 NLRP8Q86W28 1048 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 NRSN1Q8IZ57 195 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 SLC44A3Q8N4M1 653 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 RPLP0P6Q8NHW5 317 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 OR4K3Q96R72 315 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 RNPEPL1Q9HAU8 725 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 MOSPD1Q9UJG1 213 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 POMPQ9Y244 141 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 GPR45Q9Y5Y3 372 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 TBC1D3DA0A087WVF3 549 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 TBC1D3IA0A087WXS9 549 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 TBC1D3EA0A087X179 549 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 TBC1D3KA0A087X1G2 549 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 PRAMEF33A0A0G2JMD5 474 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 TBC1D3FA6NER0 549 aaPredicted RBP13.33□□□□□ -0.28
HCFC2-202ENST00000544223 TBC1D3LB9A6J9 549 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 E7EQ34 232 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 PSMD11O00231 422 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 LSM1O15116 133 aaKnown RBP13.33□□□□□ -0.28
HCFC2-202ENST00000544223 DNAJA2O60884 412 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 MATN4O95460 622 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 SNRPB2P08579 225 aaKnown RBP13.33□□□□□ -0.28
HCFC2-202ENST00000544223 TBC1D3HP0C7X1 549 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 SLC2A4P14672 509 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 DGKQP52824 942 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 CLDN2P57739 230 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 MEF2AQ02078 507 aaPredicted RBP13.33□□□□□ -0.28
HCFC2-202ENST00000544223 CCNIQ14094 377 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 ATP6AP1LQ52LC2 224 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 TBC1D3GQ6DHY5 549 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 TBC1D3CQ6IPX1 549 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 TMEM92Q6UXU6 159 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 CHST15Q7LFX5 561 aaPredicted RBP13.33□□□□□ -0.28
HCFC2-202ENST00000544223 CYP2U1Q7Z449 544 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 TBC1D3Q8IZP1 549 aaPredicted RBP13.33□□□□□ -0.28
HCFC2-202ENST00000544223 FBXW8Q8N3Y1 598 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 MCOLN3Q8TDD5 553 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 HIC2Q96JB3 615 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 SLC32A1Q9H598 525 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 PIF1Q9H611 641 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 TRIM39Q9HCM9 518 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms