RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 IGSF1Q8N6C5 1336 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 ATXN2Q99700 1313 aaKnown RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 AKAP12Q02952 1782 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 CASZ1Q86V15 1759 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 CLTCL1P53675 1640 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 PARP4Q9UKK3 1724 aaKnown RBP4.1□□□□□ -1.75
SNHG1-217ENST00000541578 TMEM189-UBE2V1I3L0A0 370 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 SLC33A1O00400 549 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-217ENST00000541578 DNM1LO00429 736 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 ZIC3O60481 467 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 KERAO60938 352 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 CRCPO75575 148 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 PNPP00491 289 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 MYL6BP14649 208 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 PSMA3P25788 255 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 HNRNPH1P31943 449 aaKnown RBP4.1□□□□□ -1.75
SNHG1-217ENST00000541578 RFX2P48378 723 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 CDK3Q00526 305 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 UBE2V1Q13404 147 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 MVPQ14764 893 aaKnown RBP4.1□□□□□ -1.75
SNHG1-217ENST00000541578 CCDC158Q5M9N0 1113 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 OTUD1Q5VV17 481 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-217ENST00000541578 ALS2CLQ60I27 953 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 NSUN5P2Q63ZY6 315 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 FRG2Q64ET8 278 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 ANKRD54Q6NXT1 300 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 ALKBH5Q6P6C2 394 aaKnown RBP4.1□□□□□ -1.75
SNHG1-217ENST00000541578 ZNF449Q6P9G9 518 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 PAPD4Q6PIY7 484 aaKnown RBP4.1□□□□□ -1.75
SNHG1-217ENST00000541578 TOM1L2Q6ZVM7 507 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 CTU1Q7Z7A3 348 aaKnown RBP4.1□□□□□ -1.75
SNHG1-217ENST00000541578 PHLDB2Q86SQ0 1253 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 TLK2Q86UE8 772 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 ADIPOR2Q86V24 386 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 ZC3HC1Q86WB0 502 aaKnown RBP4.1□□□□□ -1.75
SNHG1-217ENST00000541578 MAML2Q8IZL2 1156 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-217ENST00000541578 RASGEF1CQ8N431 466 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 IQCF1Q8N6M8 205 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-217ENST00000541578 ADAMTS14Q8WXS8 1223 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 SNX21Q969T3 373 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 TBC1D31Q96DN5 1066 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 ZNF479Q96JC4 524 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 CABS1Q96KC9 395 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 INPP5KQ9BT40 448 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 SLC5A7Q9GZV3 580 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 C17orf75Q9HAS0 396 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 TRPV4Q9HBA0 871 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 KRCC1Q9NPI7 259 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-217ENST00000541578 SEPT10Q9P0V9 454 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 VPS18Q9P253 973 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 CACNG4Q9UBN1 327 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 FBXL2Q9UKC9 423 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 ITGA11Q9UKX5 1188 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 ACSL5Q9ULC5 683 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 LIPT1Q9Y234 373 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 ITM2BQ9Y287 266 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 GRIP1Q9Y3R0 1128 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 LOXL2Q9Y4K0 774 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 KIAA0232Q92628 1395 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 BCL9O00512 1426 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 MYOM1P52179 1685 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 ALS2Q96Q42 1657 aa4.1□□□□□ -1.75
SNHG1-217ENST00000541578 OOEPA6NGQ2 149 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 VWA5AO00534 786 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 CLDN4O14493 209 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 ASAP2O43150 1006 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 VNN2O95498 520 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 RLN1P04808 185 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 SNRNP70P08621 437 aaKnown RBP4.09□□□□□ -1.75
SNHG1-217ENST00000541578 NAGAP17050 411 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 CDC25CP30307 473 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 CRKLP46109 303 aaKnown RBP4.09□□□□□ -1.75
SNHG1-217ENST00000541578 SLC9A3P48764 834 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 CD81P60033 236 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 STX1BP61266 288 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 TUBB4BP68371 445 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 ARF5P84085 180 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 ZXDBP98169 803 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 ROR2Q01974 943 aaKnown RBP4.09□□□□□ -1.75
SNHG1-217ENST00000541578 CBX3Q13185 183 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 MELKQ14680 651 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 MEP1BQ16820 701 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 TYSND1Q2T9J0 566 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 VWC2Q2TAL6 325 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 ZRANB3Q5FWF4 1079 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 LRRC73Q5JTD7 316 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 KCNT1Q5JUK3 1230 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 FAM91A1Q658Y4 838 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 CASC4Q6P4E1 433 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 CNSTQ6PJW8 725 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 LINC00696Q6ZRV3 163 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 Q6ZTK2 550 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 ADHFE1Q8IWW8 467 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 CLYBLQ8N0X4 340 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 NHLRC2Q8NBF2 726 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 FIBINQ8TAL6 211 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 TAS1R2Q8TE23 839 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 CORO2AQ92828 525 aa4.09□□□□□ -1.75
SNHG1-217ENST00000541578 PTP4A1Q93096 173 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms