RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 SLC22A14Q9Y267 594 aa21.9■■□□□ 1.1
HOMER3-204ENST00000539827 PIAS3Q9Y6X2 628 aa21.9■■□□□ 1.1
HOMER3-204ENST00000539827 H3BM21 787 aa21.89■■□□□ 1.09
HOMER3-204ENST00000539827 IDO1P14902 403 aa21.89■■□□□ 1.09
HOMER3-204ENST00000539827 STARD3Q14849 445 aa21.89■■□□□ 1.09
HOMER3-204ENST00000539827 TRMT5Q32P41 509 aaKnown RBP21.89■■□□□ 1.09
HOMER3-204ENST00000539827 ATP6AP1LQ52LC2 224 aa21.89■■□□□ 1.09
HOMER3-204ENST00000539827 IER5LQ5T953 404 aa21.89■■□□□ 1.09
HOMER3-204ENST00000539827 TTC23LQ6PF05 361 aa21.89■■□□□ 1.09
HOMER3-204ENST00000539827 PGAM4Q8N0Y7 254 aa21.89■■□□□ 1.09
HOMER3-204ENST00000539827 FNDC5Q8NAU1 212 aa21.89■■□□□ 1.09
HOMER3-204ENST00000539827 CCDC124Q96CT7 223 aaKnown RBP21.89■■□□□ 1.09
HOMER3-204ENST00000539827 COX14Q96I36 57 aa21.89■■□□□ 1.09
HOMER3-204ENST00000539827 CDRT15Q96T59 188 aa21.89■■□□□ 1.09
HOMER3-204ENST00000539827 SLC25A23Q9BV35 468 aa21.89■■□□□ 1.09
HOMER3-204ENST00000539827 ACTR8Q9H981 624 aa21.89■■□□□ 1.09
HOMER3-204ENST00000539827 TRPM6Q9BX84 2022 aa21.89■■□□□ 1.09
HOMER3-204ENST00000539827 VEGFDO43915 354 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 CLDN9O95484 217 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 CATP04040 527 aaKnown RBP21.88■■□□□ 1.09
HOMER3-204ENST00000539827 DPP6P42658 865 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 ERVK-8P63133 956 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 NR6A1Q15406 480 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 XKR5Q6UX68 686 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 MTFMTQ96DP5 389 aaKnown RBP21.88■■□□□ 1.09
HOMER3-204ENST00000539827 FOPNLQ96NB1 174 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 LGR4Q9BXB1 951 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 SDR39U1Q9NRG7 319 aaPredicted RBP21.88■■□□□ 1.09
HOMER3-204ENST00000539827 DNAJC11Q9NVH1 559 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 LIMD1Q9UGP4 676 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 MANBAO00462 879 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 LIN7AO14910 233 aaPredicted RBP21.88■■□□□ 1.09
HOMER3-204ENST00000539827 NRP2O60462 931 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 PSMG1O95456 288 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 HOXB2P14652 356 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 PFN3P60673 137 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 FGL2Q14314 439 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 LAYNQ6UX15 382 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 BNC2Q6ZN30 1099 aaPredicted RBP21.88■■□□□ 1.09
HOMER3-204ENST00000539827 PKP4Q99569 1192 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 PRO3102Q9H379 93 aa21.88■■□□□ 1.09
HOMER3-204ENST00000539827 ZNF490Q9ULM2 529 aaPredicted RBP21.88■■□□□ 1.09
HOMER3-204ENST00000539827 PRPF19Q9UMS4 504 aaKnown RBP21.88■■□□□ 1.09
HOMER3-204ENST00000539827 MRASO14807 208 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 PAK4O96013 591 aaPredicted RBP21.87■■□□□ 1.09
HOMER3-204ENST00000539827 MTTPP55157 894 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 ACTR3P61158 418 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 CDK3Q00526 305 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 LRP8Q14114 963 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 NFE2L1Q14494 772 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 CPSF6Q16630 551 aaKnown RBP eCLIP21.87■■□□□ 1.09
HOMER3-204ENST00000539827 OR14C36Q8NHC7 312 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 STMN2Q93045 179 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 ZNF514Q96K75 400 aaPredicted RBP21.87■■□□□ 1.09
HOMER3-204ENST00000539827 OSBPL6Q9BZF3 934 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 NDE1Q9NXR1 346 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 BRWD1Q9NSI6 2320 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 A0A1W2PQF6 199 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 LSM1O15116 133 aaKnown RBP21.87■■□□□ 1.09
HOMER3-204ENST00000539827 LMNAP02545 664 aaKnown RBP21.87■■□□□ 1.09
HOMER3-204ENST00000539827 DNTTP04053 509 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 IRF4Q15306 451 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 TRMT11Q7Z4G4 463 aaKnown RBP21.87■■□□□ 1.09
HOMER3-204ENST00000539827 RALGPS2Q86X27 583 aaPredicted RBP21.87■■□□□ 1.09
HOMER3-204ENST00000539827 SLC44A3Q8N4M1 653 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 LINC00615Q96LM1 132 aaPredicted RBP21.87■■□□□ 1.09
HOMER3-204ENST00000539827 CCDC138Q96M89 665 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 DCLRE1BQ9H816 532 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 KCNK12Q9HB15 430 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 STOX2Q9P2F5 926 aaPredicted RBP21.87■■□□□ 1.09
HOMER3-204ENST00000539827 GPR34Q9UPC5 381 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 CCL27Q9Y4X3 112 aa21.87■■□□□ 1.09
HOMER3-204ENST00000539827 DOCK9Q9BZ29 2069 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 SZT2Q5T011 3432 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 ULK1O75385 1050 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 PSME3P61289 254 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 UFM1P61960 85 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 NAE1Q13564 534 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 AP5B1Q2VPB7 878 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 VPS26BQ4G0F5 336 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 SWT1Q5T5J6 900 aaKnown RBP21.86■■□□□ 1.09
HOMER3-204ENST00000539827 AGTRAPQ6RW13 159 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 FAM83HQ6ZRV2 1179 aaPredicted RBP21.86■■□□□ 1.09
HOMER3-204ENST00000539827 CHCHD4Q8N4Q1 142 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 ENDOVQ8N8Q3 282 aaKnown RBP21.86■■□□□ 1.09
HOMER3-204ENST00000539827 PPFIBP2Q8ND30 876 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 TEX37Q96LM6 180 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 SLC29A3Q9BZD2 475 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 POMPQ9Y244 141 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 COL4A2P08572 1712 aa21.86■■□□□ 1.09
HOMER3-204ENST00000539827 SLC28A1O00337 649 aa21.85■■□□□ 1.09
HOMER3-204ENST00000539827 PRAMEF4O60810 478 aa21.85■■□□□ 1.09
HOMER3-204ENST00000539827 C1orf105O95561 183 aa21.85■■□□□ 1.09
HOMER3-204ENST00000539827 CAPN3P20807 821 aa21.85■■□□□ 1.09
HOMER3-204ENST00000539827 HMGCS1Q01581 520 aa21.85■■□□□ 1.09
HOMER3-204ENST00000539827 INPP5AQ14642 412 aa21.85■■□□□ 1.09
HOMER3-204ENST00000539827 RCN1Q15293 331 aa21.85■■□□□ 1.09
HOMER3-204ENST00000539827 PRAMEF9Q5VWM5 478 aa21.85■■□□□ 1.09
HOMER3-204ENST00000539827 C11orf96Q7Z7L8 435 aa21.85■■□□□ 1.09
HOMER3-204ENST00000539827 THOC6Q86W42 341 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms