RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 OTOP3Q7RTS5 596 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 CHPFQ8IZ52 775 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 TMIEQ8NEW7 156 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 OR10A6Q8NH74 314 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 LHPPQ9H008 270 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 CAPN10Q9HC96 672 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 SCUBE2Q9NQ36 999 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 PXMP2Q9NR77 195 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 RDH8Q9NYR8 311 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 ERVK-18Q9QC07 812 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 VWA7Q9Y334 891 aa5.31□□□□□ -1.56
PTPRD-213ENST00000537002 NEMP2A6NFY4 417 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ARHGEF33A8MVX0 844 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 SLC16A6O15403 523 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 HOXC11O43248 304 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 SUV39H1O43463 412 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 PIGRP01833 764 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 SLURP2P0DP57 97 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 POU2F1P14859 743 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 PAICSP22234 425 aaKnown RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 HTR3AP46098 478 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 AIF1P55008 147 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 RPA4Q13156 261 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 HECTD2Q5U5R9 776 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 MARC1Q5VT66 337 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 MFSD14CQ5VZR4 134 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ASB18Q6ZVZ8 466 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CRELD1Q96HD1 420 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 LRRC3Q9BY71 257 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 MAGIXQ9H6Y5 334 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CATSPERZQ9NTU4 200 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 RNF19AQ9NV58 838 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 OPTCQ9UBM4 332 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 SAMD4AQ9UPU9 718 aaKnown RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 MICAL3Q7RTP6 2002 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ELOVL7A1L3X0 281 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 GNB5O14775 395 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 OR10H3O60404 316 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 PRAMEF1O95521 474 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 NFICP08651 508 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 SLC2A2P11168 524 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 KEAP1Q14145 624 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 SHROOM1Q2M3G4 852 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 FAM214AQ32MH5 1076 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 MAP1SQ66K74 1059 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 MIB1Q86YT6 1006 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 UBQLNLQ8IYU4 475 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 MEIOBQ8N635 442 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 AP5M1Q9H0R1 490 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 EMCNQ9ULC0 261 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 RNF6Q9Y252 685 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 PRMT5O14744 637 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 MLYCDO95822 493 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CYP11A1P05108 521 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ITGAMP11215 1152 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 COL6A1P12109 1028 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 BMP4P12644 408 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CES1P23141 567 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 GABRB3P28472 473 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 GPC1P35052 558 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CD86P42081 329 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 RORCP51449 518 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 RPL6Q02878 288 aaKnown RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CXCL9Q07325 125 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 GRIK5Q16478 980 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 USP39Q53GS9 565 aaKnown RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 YIF1BQ5BJH7 314 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 SNAP47Q5SQN1 464 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 HIST2H2AA3Q6FI13 130 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ZPBP2Q6X784 338 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 SLC26A9Q7LBE3 791 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ADGRG5Q8IZF4 528 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 C1orf52Q8N6N3 182 aaKnown RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 KCT2Q8NC54 265 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 SLC37A3Q8NCC5 494 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 OR6F1Q8NGZ6 308 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 LILRB1Q8NHL6 650 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 NDNFQ8TB73 568 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 LGALS12Q96DT0 336 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 PPP3R2Q96LZ3 170 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF512Q96ME7 567 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 IDI2Q9BXS1 227 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 NAA50Q9GZZ1 169 aaKnown RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 TKTL2Q9H0I9 626 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 TUT1Q9H6E5 874 aaKnown RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CUEDC1Q9NWM3 386 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 GIMAP2Q9UG22 337 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 PCDHB3Q9Y5E6 796 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 STYXL1Q9Y6J8 313 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CCL22O00626 93 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CAPN5O15484 640 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ENTPD3O75355 529 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ITGA10O75578 1167 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 SLITRK5O94991 958 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 C1QAP02745 245 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 AKAP5P24588 427 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 NMBRP28336 390 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 TTLL9Q3SXZ7 439 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 RABL3Q5HYI8 236 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms