RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PTPRQQ9UMZ3 2332 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 KIAA1549LQ6ZVL6 1849 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 NUP210Q8TEM1 1887 aaPredicted RBP5.43□□□□□ -1.54
CLIP1-207ENST00000536634 SPENQ96T58 3664 aaKnown RBP5.43□□□□□ -1.54
CLIP1-207ENST00000536634 TNRC6BQ9UPQ9 1833 aaKnown RBP5.42□□□□□ -1.54
CLIP1-207ENST00000536634 GOLGA4Q13439 2230 aaKnown RBP5.42□□□□□ -1.54
CLIP1-207ENST00000536634 BCLAF3A2AJT9 711 aaKnown RBP5.42□□□□□ -1.54
CLIP1-207ENST00000536634 PABPN1LA6NDY0 278 aaKnown RBP5.42□□□□□ -1.54
CLIP1-207ENST00000536634 CHADO15335 359 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 AKAP3O75969 853 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 IGHDP01880 384 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 PRB1P04280 392 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 PRSS2P07478 247 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 AXLP30530 894 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 CXCR3P49682 368 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 PSMC5P62195 406 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 BNC1Q01954 994 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 FCHO2Q0JRZ9 810 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 TBL3Q12788 808 aaKnown RBP5.42□□□□□ -1.54
CLIP1-207ENST00000536634 TEAD2Q15562 447 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 WDR45BQ5MNZ6 344 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 STXBP5Q5T5C0 1151 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 ATG16L1Q676U5 607 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 NADSYN1Q6IA69 706 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 LRRTM4Q86VH4 590 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 DENND6AQ8IWF6 608 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 CPXM2Q8N436 756 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 ZNF713Q8N859 430 aaPredicted RBP5.42□□□□□ -1.54
CLIP1-207ENST00000536634 RFWD2Q8NHY2 731 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 RNF183Q96D59 192 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 MSANTD3Q96H12 275 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 CEP170P1Q96L14 293 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 CD180Q99467 661 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 JPH2Q9BR39 696 aaPredicted RBP5.42□□□□□ -1.54
CLIP1-207ENST00000536634 C8orf33Q9H7E9 229 aaPredicted RBP5.42□□□□□ -1.54
CLIP1-207ENST00000536634 SPATS2LQ9NUQ6 558 aaKnown RBP5.42□□□□□ -1.54
CLIP1-207ENST00000536634 ALKBH4Q9NXW9 302 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 IFT80Q9P2H3 777 aaPredicted RBP5.42□□□□□ -1.54
CLIP1-207ENST00000536634 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.42□□□□□ -1.54
CLIP1-207ENST00000536634 HSF4Q9ULV5 492 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 PROCRQ9UNN8 238 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 PTPRDP23468 1912 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 ADAMTS9Q9P2N4 1935 aa5.42□□□□□ -1.54
CLIP1-207ENST00000536634 FLNCQ14315 2725 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 A0A1B0GUA9 196 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 C17orf113A0A1B0GUU1 675 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.41□□□□□ -1.54
CLIP1-207ENST00000536634 CBY3A6NI87 242 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 PRRG1O14668 218 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 ZNF197O14709 1029 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 TIMM23O14925 209 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 ZBTB43O43298 467 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 SLC37A4O43826 429 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 EDN1P05305 212 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 GLRA2P23416 452 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 BRCC3P46736 316 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 QARSP47897 775 aaKnown RBP5.41□□□□□ -1.54
CLIP1-207ENST00000536634 IRX4P78413 519 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 ADORA2A-AS1P86434 159 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 TWF1Q12792 350 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 ELAVL2Q12926 359 aaKnown RBP5.41□□□□□ -1.54
CLIP1-207ENST00000536634 ZNF667Q5HYK9 610 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 GLRA4Q5JXX5 417 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 SLC8B1Q6J4K2 584 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 SLC27A1Q6PCB7 646 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.41□□□□□ -1.54
CLIP1-207ENST00000536634 RALGPS2Q86X27 583 aaPredicted RBP5.41□□□□□ -1.54
CLIP1-207ENST00000536634 HACE1Q8IYU2 909 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 CHCHD4Q8N4Q1 142 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 ZMIZ2Q8NF64 920 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 ZNF461Q8TAF7 563 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 TMED6Q8WW62 240 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 RUFY2Q8WXA3 655 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 ELP4Q96EB1 424 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 C6orf50Q9HD87 102 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 TMEM51Q9NW97 253 aa5.41□□□□□ -1.54
CLIP1-207ENST00000536634 SHROOM3Q8TF72 1996 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 KLF18A0A0U1RQI7 1052 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 TMEM189-UBE2V1I3L0A0 370 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 J3KR12 359 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 EBAG9O00559 213 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 B3GAT3O94766 335 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 VNN2O95498 520 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 PRAMEF12O95522 483 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 PPP1R3DO95685 299 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 EGFP01133 1207 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 CBSLP0DN79 551 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 FGF3P11487 239 aaPredicted RBP5.4□□□□□ -1.54
CLIP1-207ENST00000536634 BCKDHBP21953 392 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 U2AF2P26368 475 aaKnown RBP eCLIP5.4□□□□□ -1.542e-6■■■■□ 26.3
CLIP1-207ENST00000536634 YWHABP31946 246 aaKnown RBP5.4□□□□□ -1.54
CLIP1-207ENST00000536634 ELF1P32519 619 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 RYKP34925 604 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 CBSP35520 551 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 ARL2P36404 184 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 MXI1P50539 228 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 ARPP19P56211 112 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 CYP4A11Q02928 519 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 DHX8Q14562 1220 aaKnown RBP5.4□□□□□ -1.54
CLIP1-207ENST00000536634 NFATC4Q14934 902 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms