RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 DNAJC21Q5F1R6 531 aaKnown RBP12.7□□□□□ -0.38
RTN3-207ENST00000536011 RAB43Q86YS6 212 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 HPS6Q86YV9 775 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 TAB3Q8N5C8 712 aaPredicted RBP12.7□□□□□ -0.38
RTN3-207ENST00000536011 C19orf47Q8N9M1 422 aaKnown RBP12.7□□□□□ -0.38
RTN3-207ENST00000536011 SLC38A9Q8NBW4 561 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 PPHLN1Q8NEY8 458 aaKnown RBP12.7□□□□□ -0.38
RTN3-207ENST00000536011 OR5AR1Q8NGP9 310 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 ATG4AQ8WYN0 398 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 IP6K3Q96PC2 410 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 RUFY1Q96T51 708 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 XKR8Q9H6D3 395 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 PCMTD2Q9NV79 361 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 PAK5Q9P286 719 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 ANAPC5Q9UJX4 755 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 SRPK3Q9UPE1 567 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 ICKQ9UPZ9 632 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 TDRKHQ9Y2W6 561 aaKnown RBP12.7□□□□□ -0.38
RTN3-207ENST00000536011 CAPN6Q9Y6Q1 641 aa12.7□□□□□ -0.38
RTN3-207ENST00000536011 PIKFYVEQ9Y2I7 2098 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 A0A0J9YY10 115 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 TCRBV7S2A1N4TA0A589 114 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 AP3B1O00203 1094 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 DNAJB5O75953 348 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 OR2B3O76000 313 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 CHRM5P08912 532 aaPredicted RBP12.69□□□□□ -0.38
RTN3-207ENST00000536011 UGT2B7P16662 529 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 NR1D1P20393 614 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 ACADLP28330 430 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 KIR2DS3Q14952 304 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 BRD3Q15059 726 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 TMED2Q15363 201 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 OASLQ15646 514 aaKnown RBP12.69□□□□□ -0.38
RTN3-207ENST00000536011 IGFBP7Q16270 282 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 FASTKD1Q53R41 847 aaKnown RBP12.69□□□□□ -0.38
RTN3-207ENST00000536011 ZNF789Q5FWF6 425 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 TSTD2Q5T7W7 516 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 CPZQ66K79 652 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 FAM198BQ6UWH4 519 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 C4orf22Q6V702 233 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 UNC5AQ6ZN44 842 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 CDHR3Q6ZTQ4 885 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 MED25Q71SY5 747 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 TMEM102Q8N9M5 508 aaPredicted RBP12.69□□□□□ -0.38
RTN3-207ENST00000536011 OR13J1Q8NGT2 312 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 OR6P1Q8NGX9 317 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 OR4L1Q8NH43 312 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 GSDMBQ8TAX9 411 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 PROKR1Q8TCW9 393 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 ASZ1Q8WWH4 475 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 HDAC10Q969S8 669 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 SGSM3Q96HU1 749 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 ETNK1Q9HBU6 452 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 RAB6BQ9NRW1 208 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 GPN3Q9UHW5 284 aaPredicted RBP12.69□□□□□ -0.38
RTN3-207ENST00000536011 ZNF451Q9Y4E5 1061 aa12.69□□□□□ -0.38
RTN3-207ENST00000536011 SLC5A10A0PJK1 596 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 OR51F1A6NGY5 319 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 ZSCAN9O15535 394 aaPredicted RBP12.68□□□□□ -0.38
RTN3-207ENST00000536011 ZNF749O43361 778 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 KLHL41O60662 606 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 TMEM63AO94886 807 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 GOT2P00505 430 aaKnown RBP12.68□□□□□ -0.38
RTN3-207ENST00000536011 IGHEP01854 428 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 APOA4P06727 396 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 APRTP07741 180 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 PVRP15151 417 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 PTGIRP43119 386 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 CD97P48960 835 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 TTPAP49638 278 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 CCL11P51671 97 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 ACVR1Q04771 509 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 UBAP2LQ14157 1087 aaKnown RBP12.68□□□□□ -0.38
RTN3-207ENST00000536011 SLC5A12Q1EHB4 618 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 COLEC12Q5KU26 742 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 PAPD7Q5XG87 772 aaKnown RBP12.68□□□□□ -0.38
RTN3-207ENST00000536011 SLC13A5Q86YT5 568 aaPredicted RBP12.68□□□□□ -0.38
RTN3-207ENST00000536011 SLC22A15Q8IZD6 547 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 SPC24Q8NBT2 197 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 ADAMTS17Q8TE56 1095 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 DENND1AQ8TEH3 1009 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 MIB2Q96AX9 1013 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 SLC22A18Q96BI1 424 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 TRIM55Q9BYV6 548 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 KLHL25Q9H0H3 589 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 TXLNGQ9NUQ3 528 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 IRAK4Q9NWZ3 460 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 TCAF1Q9Y4C2 921 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 MRFAP1Q9Y605 127 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 PRSS21Q9Y6M0 314 aa12.68□□□□□ -0.38
RTN3-207ENST00000536011 PRRC2CQ9Y520 2896 aaKnown RBP12.67□□□□□ -0.38
RTN3-207ENST00000536011 TTLL8A6PVC2 850 aa12.67□□□□□ -0.38
RTN3-207ENST00000536011 ISM1B1AKI9 464 aa12.67□□□□□ -0.38
RTN3-207ENST00000536011 K7EM74 188 aa12.67□□□□□ -0.38
RTN3-207ENST00000536011 DPM1O60762 260 aa12.67□□□□□ -0.38
RTN3-207ENST00000536011 VPS4BO75351 444 aa12.67□□□□□ -0.38
RTN3-207ENST00000536011 VARSP26640 1264 aaKnown RBP12.67□□□□□ -0.38
RTN3-207ENST00000536011 RAB28P51157 221 aa12.67□□□□□ -0.38
RTN3-207ENST00000536011 CHAF1BQ13112 559 aa12.67□□□□□ -0.38
RTN3-207ENST00000536011 RPS6KA1Q15418 735 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms