RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 PSMA8Q8TAA3 256 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 WFIKKN2Q8TEU8 576 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 DNASE2BQ8WZ79 361 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 SPXQ9BT56 116 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 FNDC11Q9BVV2 318 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 GTPBP2Q9BX10 602 aaKnown RBP4.23□□□□□ -1.73
USP47-211ENST00000531513 SEZ6LQ9BYH1 1024 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 SPRY4Q9C004 299 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 RNF150Q9ULK6 438 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 ABT1Q9ULW3 272 aaKnown RBP4.23□□□□□ -1.73
USP47-211ENST00000531513 LOXL2Q9Y4K0 774 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 TCF20Q9UGU0 1960 aaKnown RBP4.23□□□□□ -1.73
USP47-211ENST00000531513 CCDC69A6NI79 296 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 ST8SIA3O43173 380 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 AP5Z1O43299 807 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 OR10H2O60403 315 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 IGKV3-20P01619 116 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 PCP11498 1178 aaKnown RBP4.22□□□□□ -1.73
USP47-211ENST00000531513 NT5C2P49902 561 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 UBASH3AP57075 661 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 STARD6P59095 220 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 CRYZQ08257 329 aaKnown RBP4.22□□□□□ -1.73
USP47-211ENST00000531513 TRAF1Q13077 416 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 TNK1Q13470 666 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 GPR18Q14330 331 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 HFEQ30201 348 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 FAM174BQ3ZCQ3 159 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 ZNF789Q5FWF6 425 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 SPOUT1Q5T280 376 aaKnown RBP4.22□□□□□ -1.73
USP47-211ENST00000531513 CASC4Q6P4E1 433 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 ENPP7Q6UWV6 458 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.22□□□□□ -1.73
USP47-211ENST00000531513 CTU1Q7Z7A3 348 aaKnown RBP4.22□□□□□ -1.73
USP47-211ENST00000531513 SFRP1Q8N474 314 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 ANKRD13CQ8N6S4 541 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 ACVR1CQ8NER5 493 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 THAP6Q8TBB0 222 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 MAGEC3Q8TD91 643 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 MOB3AQ96BX8 217 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 CMKLR1Q99788 373 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 SF3B5Q9BWJ5 86 aaKnown RBP4.22□□□□□ -1.73
USP47-211ENST00000531513 SEMA6AQ9H2E6 1030 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 LMAN1LQ9HAT1 526 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 KRCC1Q9NPI7 259 aaPredicted RBP4.22□□□□□ -1.73
USP47-211ENST00000531513 CD93Q9NPY3 652 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 TRPC4Q9UBN4 977 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 APPL1Q9UKG1 709 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 STX8Q9UNK0 236 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 GRIP1Q9Y3R0 1128 aa4.22□□□□□ -1.73
USP47-211ENST00000531513 ACEP12821 1306 aa4.21□□□□□ -1.73
USP47-211ENST00000531513 A0A087WYN8 130 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 IGHV4-28A0A0C4DH34 117 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 PRSS51A0A1B0GVH4 220 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 A0A1W2PP11 408 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 NEMP2A6NFY4 417 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 VWA5AO00534 786 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 SOCS6O14544 535 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 DVL1O14640 695 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 AKAP3O75969 853 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 PGLSO95336 258 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 SLC16A8O95907 504 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 CYP1A2P05177 515 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 CSN3P07498 182 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 MPZP25189 248 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 MAPK3P27361 379 aaPredicted RBP4.21□□□□□ -1.74
USP47-211ENST00000531513 CTNNB1P35222 781 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 FRKP42685 505 aaPredicted RBP4.21□□□□□ -1.74
USP47-211ENST00000531513 RFX5P48382 616 aaPredicted RBP4.21□□□□□ -1.74
USP47-211ENST00000531513 LHX1P48742 406 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 CLCNKAP51800 687 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 KRTAP10-5P60370 271 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 SLC39A14Q15043 492 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 SGCBQ16585 318 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 MDH1BQ5I0G3 518 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 PAPPA-AS1Q5QFB9 102 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 GCNT6Q5T4J0 391 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 TXNRD3NBQ6F5E7 133 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 TYW3Q6IPR3 259 aaKnown RBP4.21□□□□□ -1.74
USP47-211ENST00000531513 MFSD12Q6NUT3 480 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 WDR73Q6P4I2 378 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 NOTUMQ6P988 496 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 TMPRSS11FQ6ZWK6 438 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 RBM23Q86U06 439 aaKnown RBP4.21□□□□□ -1.74
USP47-211ENST00000531513 SLC9B2Q86UD5 537 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 FOXP4Q8IVH2 680 aaPredicted RBP4.21□□□□□ -1.74
USP47-211ENST00000531513 C7orf57Q8NEG2 295 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 LPCAT1Q8NF37 534 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 OR5R1Q8NH85 324 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 LILRB1Q8NHL6 650 aaPredicted RBP4.21□□□□□ -1.74
USP47-211ENST00000531513 SMPDL3BQ92485 455 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 LPAR1Q92633 364 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 RIT1Q92963 219 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 SNRNP40Q96DI7 357 aaKnown RBP4.21□□□□□ -1.74
USP47-211ENST00000531513 SPATA33Q96N06 139 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 ZNF582Q96NG8 517 aaPredicted RBP4.21□□□□□ -1.74
USP47-211ENST00000531513 RUNDC3BQ96NL0 473 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 MTERF1Q99551 399 aaKnown RBP4.21□□□□□ -1.74
USP47-211ENST00000531513 SLX1AQ9BQ83 275 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 FSD1Q9BTV5 496 aa4.21□□□□□ -1.74
USP47-211ENST00000531513 LMF2Q9BU23 707 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms