RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 ACTRT1Q8TDG2 376 aa11.67□□□□□ -0.54
COPB1-206ENST00000529210 CT55Q8WUE5 264 aa11.67□□□□□ -0.54
COPB1-206ENST00000529210 APOBEC4Q8WW27 367 aaKnown RBP11.67□□□□□ -0.54
COPB1-206ENST00000529210 ELMO2Q96JJ3 720 aa11.67□□□□□ -0.54
COPB1-206ENST00000529210 OR2A14Q96R47 310 aa11.67□□□□□ -0.54
COPB1-206ENST00000529210 TCF12Q99081 682 aa11.67□□□□□ -0.54
COPB1-206ENST00000529210 GRPEL1Q9HAV7 217 aa11.67□□□□□ -0.54
COPB1-206ENST00000529210 ENAMQ9NRM1 1142 aa11.67□□□□□ -0.54
COPB1-206ENST00000529210 SOHLH2Q9NX45 425 aa11.67□□□□□ -0.54
COPB1-206ENST00000529210 MARCH4Q9P2E8 410 aaPredicted RBP11.67□□□□□ -0.54
COPB1-206ENST00000529210 GNPTGQ9UJJ9 305 aa11.67□□□□□ -0.54
COPB1-206ENST00000529210 MRPS18BQ9Y676 258 aaKnown RBP11.67□□□□□ -0.54
COPB1-206ENST00000529210 SPTBP11277 2137 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 TCRBV7S3A2A0A539 114 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 MAGEB16A2A368 324 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 PGRMC1O00264 195 aaKnown RBP11.66□□□□□ -0.54
COPB1-206ENST00000529210 KPNA5O15131 536 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 MAP3K7O43318 606 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 KRT14P02533 472 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 RPN2P04844 631 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 APOA4P06727 396 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 CHRM5P08912 532 aaPredicted RBP11.66□□□□□ -0.54
COPB1-206ENST00000529210 RAB40ALP0C0E4 278 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 UGT2B7P16662 529 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 OGNP20774 298 aaKnown RBP11.66□□□□□ -0.54
COPB1-206ENST00000529210 MGAT1P26572 445 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 PTPN4P29074 926 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 PKLRP30613 574 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 MAGEA3P43357 314 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 GABRA4P48169 554 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 FNTAP49354 379 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 RAB28P51157 221 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 CRADDP78560 199 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 ABRQ12979 859 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 KCNAB2Q13303 367 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 GBX1Q14549 363 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 PLEKHS1Q5SXH7 462 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 RNF187Q5TA31 235 aaPredicted RBP11.66□□□□□ -0.54
COPB1-206ENST00000529210 MRNIPQ6NTE8 343 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 FBXO38Q6PIJ6 1188 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 CAND1Q86VP6 1230 aaKnown RBP11.66□□□□□ -0.54
COPB1-206ENST00000529210 TMEM126BQ8IUX1 230 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 VRK3Q8IV63 474 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 DCUN1D3Q8IWE4 304 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 DSELQ8IZU8 1212 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 C19orf47Q8N9M1 422 aaKnown RBP11.66□□□□□ -0.54
COPB1-206ENST00000529210 SLC38A9Q8NBW4 561 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 LKAAEAR1Q8TD35 194 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 CPT1BQ92523 772 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 MFSD3Q96ES6 412 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 TCTN2Q96GX1 697 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 BIRC8Q96P09 236 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 NRTNQ99748 197 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 DPH2Q9BQC3 489 aaPredicted RBP11.66□□□□□ -0.54
COPB1-206ENST00000529210 XKR8Q9H6D3 395 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 AKIRIN1Q9H9L7 192 aaPredicted RBP11.66□□□□□ -0.54
COPB1-206ENST00000529210 SYBUQ9NX95 663 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 POLHQ9Y253 713 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 MRFAP1Q9Y605 127 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 KCNMB2Q9Y691 235 aa11.66□□□□□ -0.54
COPB1-206ENST00000529210 SNRNP200O75643 2136 aaKnown RBP11.65□□□□□ -0.54
COPB1-206ENST00000529210 A0A0J9YY10 115 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 FAM237BA0A1B0GVD1 139 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 H3BMM5 538 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 J3QKU1 62 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 ZSCAN12O43309 604 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 SUV39H1O43463 412 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 TMEM63AO94886 807 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 FKBP9O95302 570 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 NTRK1P04629 796 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 KLK3P07288 261 aaPredicted RBP11.65□□□□□ -0.54
COPB1-206ENST00000529210 HBQ1P09105 142 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 PRKAR1AP10644 381 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 ATP5DP30049 168 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 COILP38432 576 aaPredicted RBP11.65□□□□□ -0.54
COPB1-206ENST00000529210 HSPA14Q0VDF9 509 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 NFATC3Q12968 1075 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 GPS1Q13098 491 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 GPS2Q13227 327 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 GRB7Q14451 532 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 BRD3Q15059 726 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 TMED2Q15363 201 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 ZNF385CQ66K41 422 aaPredicted RBP11.65□□□□□ -0.54
COPB1-206ENST00000529210 CCDC137Q6PK04 289 aaKnown RBP11.65□□□□□ -0.54
COPB1-206ENST00000529210 NAPRTQ6XQN6 538 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 CDHR3Q6ZTQ4 885 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 SYVN1Q86TM6 617 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 LDB1Q86U70 411 aaPredicted RBP11.65□□□□□ -0.54
COPB1-206ENST00000529210 TMEM135Q86UB9 458 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 APLFQ8IW19 511 aaPredicted RBP11.65□□□□□ -0.54
COPB1-206ENST00000529210 OR1L3Q8NH93 324 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 LPGAT1Q92604 370 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 MAGOHBQ96A72 148 aaKnown RBP11.65□□□□□ -0.54
COPB1-206ENST00000529210 OSBPL9Q96SU4 736 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 XAB2Q9HCS7 855 aaKnown RBP11.65□□□□□ -0.54
COPB1-206ENST00000529210 SPHK1Q9NYA1 384 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 SERTAD3Q9UJW9 196 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 TENM4Q6N022 2769 aa11.65□□□□□ -0.54
COPB1-206ENST00000529210 IQCF5A8MTL0 148 aa11.64□□□□□ -0.55
COPB1-206ENST00000529210 TMEM150CB9EJG8 249 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms