RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PIPSLA2A3N6 862 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 SDR42E2A6NKP2 422 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 MAP3K7O43318 606 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 TPBGLP0DKB5 382 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 OGNP20774 298 aaKnown RBP32■■■□□ 2.71
SSSCA1-205ENST00000527920 MAGEA3P43357 314 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 GPR19Q15760 415 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 VRK3Q8IV63 474 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 EXD3Q8N9H8 876 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 SERPINB12Q96P63 405 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 TRAPPC9Q96Q05 1148 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 ARHGAP9Q9BRR9 750 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 LHX9Q9NQ69 397 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 KCND3Q9UK17 655 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 CROTQ9UKG9 612 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 PCDHGA6Q9Y5G7 932 aa32■■■□□ 2.71
SSSCA1-205ENST00000527920 SFTPCP11686 197 aa31.99■■■□□ 2.71
SSSCA1-205ENST00000527920 ST6GAL1P15907 406 aa31.99■■■□□ 2.71
SSSCA1-205ENST00000527920 TERF1P54274 439 aa31.99■■■□□ 2.71
SSSCA1-205ENST00000527920 CASC4Q6P4E1 433 aa31.99■■■□□ 2.71
SSSCA1-205ENST00000527920 BORAQ6PGQ7 559 aa31.99■■■□□ 2.71
SSSCA1-205ENST00000527920 OTUD6BQ8N6M0 293 aa31.99■■■□□ 2.71
SSSCA1-205ENST00000527920 LPGAT1Q92604 370 aa31.99■■■□□ 2.71
SSSCA1-205ENST00000527920 CHRNA10Q9GZZ6 450 aa31.99■■■□□ 2.71
SSSCA1-205ENST00000527920 TDRKHQ9Y2W6 561 aaKnown RBP31.99■■■□□ 2.71
SSSCA1-205ENST00000527920 C21orf140B9A014 251 aa31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 H3BMM5 538 aa31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 ZNF185O15231 689 aa31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 CPNE3O75131 537 aaKnown RBP31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 CHRM5P08912 532 aaPredicted RBP31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 DLSTP36957 453 aa31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 CSE1LP55060 971 aaKnown RBP31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 CDC20Q12834 499 aa31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 DCUN1D3Q8IWE4 304 aa31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 KRT222Q8N1A0 295 aa31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 NAT8LQ8N9F0 302 aa31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 BIRC8Q96P09 236 aa31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 VPS9D1Q9Y2B5 631 aa31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 PCDHB3Q9Y5E6 796 aa31.98■■■□□ 2.71
SSSCA1-205ENST00000527920 NKX2-8O15522 239 aa31.97■■■□□ 2.71
SSSCA1-205ENST00000527920 SCRG1O75711 98 aa31.97■■■□□ 2.71
SSSCA1-205ENST00000527920 ESR1P03372 595 aa31.97■■■□□ 2.71
SSSCA1-205ENST00000527920 KYNUQ16719 465 aa31.97■■■□□ 2.71
SSSCA1-205ENST00000527920 PLEKHS1Q5SXH7 462 aa31.97■■■□□ 2.71
SSSCA1-205ENST00000527920 OTOAQ7RTW8 1153 aa31.97■■■□□ 2.71
SSSCA1-205ENST00000527920 TMEM135Q86UB9 458 aa31.97■■■□□ 2.71
SSSCA1-205ENST00000527920 TMEM126BQ8IUX1 230 aa31.97■■■□□ 2.71
SSSCA1-205ENST00000527920 PPIL6Q8IXY8 311 aa31.97■■■□□ 2.71
SSSCA1-205ENST00000527920 SLCO2A1Q92959 643 aa31.97■■■□□ 2.71
SSSCA1-205ENST00000527920 LRFN5Q96NI6 719 aa31.97■■■□□ 2.71
SSSCA1-205ENST00000527920 OR2A14Q96R47 310 aa31.97■■■□□ 2.71
SSSCA1-205ENST00000527920 FAM117AQ9C073 453 aa31.97■■■□□ 2.71
SSSCA1-205ENST00000527920 SPTA1P02549 2419 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 RECKO95980 971 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 UGT2B7P16662 529 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 F8A1P23610 371 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 PKLRP30613 574 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 RAB28P51157 221 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 EIF3BP55884 814 aaKnown RBP31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 KIR2DS3Q14952 304 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 ANKRD20A4Q4UJ75 823 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 CTSL3PQ5NE16 218 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 NEPROQ6NW34 567 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 HOOK3Q86VS8 718 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 CILP2Q8IUL8 1156 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 FLVCR1-AS1Q8TAF5 88 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 GSDMBQ8TAX9 411 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 MRFAP1Q9Y605 127 aa31.96■■■□□ 2.71
SSSCA1-205ENST00000527920 ZNF462Q96JM2 2506 aa31.95■■■□□ 2.71
SSSCA1-205ENST00000527920 USP27XA6NNY8 438 aa31.95■■■□□ 2.71
SSSCA1-205ENST00000527920 TCN2P20062 427 aa31.95■■■□□ 2.71
SSSCA1-205ENST00000527920 DHX34Q14147 1143 aaKnown RBP31.95■■■□□ 2.71
SSSCA1-205ENST00000527920 MENTQ9BUN1 341 aa31.95■■■□□ 2.71
SSSCA1-205ENST00000527920 ADNPQ9H2P0 1102 aa31.95■■■□□ 2.71
SSSCA1-205ENST00000527920 INTS10Q9NVR2 710 aaKnown RBP31.95■■■□□ 2.71
SSSCA1-205ENST00000527920 PCYOX1Q9UHG3 505 aa31.95■■■□□ 2.71
SSSCA1-205ENST00000527920 TLN1Q9Y490 2541 aaKnown RBP31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 GOLGA8KD6RF30 607 aa31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 GOLGA8TH3BQL2 631 aa31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 GOLGA8MH3BSY2 632 aa31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 NTRK1P04629 796 aa31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 FAM87AP0C7U9 286 aa31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 ATP5DP30049 168 aa31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 DNASE1L3Q13609 305 aa31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 SLC5A12Q1EHB4 618 aa31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 ZNF789Q5FWF6 425 aa31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 ZNF517Q6ZMY9 492 aaPredicted RBP31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 C19orf47Q8N9M1 422 aaKnown RBP31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 CT55Q8WUE5 264 aa31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 ZNF669Q96BR6 464 aaPredicted RBP31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 RNF31Q96EP0 1072 aa31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 TCTN2Q96GX1 697 aa31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 GEMIN8Q9NWZ8 242 aaKnown RBP31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 SPHK1Q9NYA1 384 aa31.94■■■□□ 2.7
SSSCA1-205ENST00000527920 A0A0J9YY10 115 aa31.93■■■□□ 2.7
SSSCA1-205ENST00000527920 ZCWPW2A0A1B0GU75 182 aa31.93■■■□□ 2.7
SSSCA1-205ENST00000527920 PVRP15151 417 aa31.93■■■□□ 2.7
SSSCA1-205ENST00000527920 GRB7Q14451 532 aa31.93■■■□□ 2.7
SSSCA1-205ENST00000527920 GBX1Q14549 363 aa31.93■■■□□ 2.7
SSSCA1-205ENST00000527920 PPP1R7Q15435 360 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms