RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 DNAH3Q8TD57 4116 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 SPAG9O60271 1321 aaKnown RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 SH3PXD2BA1X283 911 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 GSAPA4D1B5 854 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 NPEPPSL1A6NEC2 478 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 UBXN8O00124 270 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 FOXE1O00358 373 aaPredicted RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 ANKRD28O15084 1053 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 MPPED1O15442 326 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 CYP27B1O15528 508 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 KIF1CO43896 1103 aaKnown RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 ATG13O75143 517 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 GCATO75600 419 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 GH2P01242 217 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 PLA2G4BP0C869 781 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 ITGA2P17301 1181 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 CHRNA5P30532 468 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 SLC6A6P31641 620 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 ARRB2P32121 409 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 PTGER4P35408 488 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 KHKP50053 298 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 ZXDBP98169 803 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 TNFRSF17Q02223 184 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 CTTNQ14247 550 aaKnown RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 SYT14P1Q58G82 188 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 Q6YL49 198 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 Q6ZNX1 250 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 LAX1Q8IWV1 398 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 BHLHE22Q8NFJ8 381 aaPredicted RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 B4GALNT2Q8NHY0 566 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 FGFBP3Q8TAT2 258 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 GANCQ8TET4 914 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 RFT1Q96AA3 541 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 ZNF707Q96C28 371 aaPredicted RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 MS4A10Q96PG2 267 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 NDNQ99608 321 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 FAM118BQ9BPY3 351 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 CXXC4Q9H2H0 198 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 HOMER3Q9NSC5 361 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 RDH8Q9NYR8 311 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 SPG21Q9NZD8 308 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 EPS15L1Q9UBC2 864 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 FBXO40Q9UH90 709 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 RAI2Q9Y5P3 530 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 NSD2O96028 1365 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 EMSYQ7Z589 1322 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 TEX13DA0A0J9YY54 714 aaPredicted RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 KRTAP23-1A1A580 65 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 OR2M5A3KFT3 312 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 CFAP73A6NFT4 308 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 OOEPA6NGQ2 149 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 LRRC3CA6NJW4 275 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 RNASET2O00584 256 aaKnown RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 SDHDO14521 159 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 PCGF2P35227 344 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 MATR3P43243 847 aaKnown RBP eCLIP1.33□□□□□ -2.2
KNL1-203ENST00000526913 CLDN15P56746 228 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 GUCY1B3Q02153 619 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 IL24Q13007 206 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 CAMK4Q16566 473 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 SYT16Q17RD7 645 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 PLEKHO1Q53GL0 409 aaPredicted RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 ODF2Q5BJF6 829 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 CEP85Q6P2H3 762 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 LINGO2Q7L985 606 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 NRARPQ7Z6K4 114 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 FOXP4Q8IVH2 680 aaPredicted RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 MMD2Q8IY49 270 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 C1orf87Q8N0U7 546 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 HDDC3Q8N4P3 179 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 LRTM2Q8N967 370 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 MIGA1Q8NAN2 632 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 MCUQ8NE86 351 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 OR52B4Q8NGK2 314 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 MAP4K1Q92918 833 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 P2RY11Q96G91 374 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 LRRC3BQ96PB8 259 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 TEFMQ96QE5 360 aaKnown RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 ALG8Q9BVK2 526 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 CUEDC2Q9H467 287 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 EBF3Q9H4W6 596 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 SEC61A2Q9H9S3 476 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 CRLF2Q9HC73 371 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 ERAP1Q9NZ08 941 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 FLRT1Q9NZU1 646 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 ABT1Q9ULW3 272 aaKnown RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 CLEC4AQ9UMR7 237 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 ERVK-11Q9UQG0 969 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 CHKBQ9Y259 395 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 PLEKHA6Q9Y2H5 1048 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 A0A0G2JLL6 359 aaPredicted RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 EIF4E1BA6NMX2 242 aaKnown RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 FAM90A26D6RGX4 464 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 TEX46H3BTG2 121 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 NDC80O14777 642 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 PSMA7O14818 248 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 WDR46O15213 610 aaKnown RBP1.33□□□□□ -2.2
KNL1-203ENST00000526913 SSX4O60224 188 aa1.33□□□□□ -2.2
KNL1-203ENST00000526913 NUAK1O60285 661 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms