RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 B4GAT1O43505 415 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 RRP9O43818 475 aaKnown RBP6.86□□□□□ -1.31
NEDD8-203ENST00000524927 MED24O75448 989 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 OR52Z1P0C646 297 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 THRAP10827 490 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 WARSP23381 471 aaKnown RBP6.86□□□□□ -1.31
NEDD8-203ENST00000524927 GABRB3P28472 473 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 PDIA3P30101 505 aaKnown RBP6.86□□□□□ -1.31
NEDD8-203ENST00000524927 ATICP31939 592 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 CASP14P31944 242 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 RBMXP38159 391 aaKnown RBP6.86□□□□□ -1.31
NEDD8-203ENST00000524927 PFN3P60673 137 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 PPARDQ03181 441 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 TUBB3Q13509 450 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 TOB2Q14106 344 aaPredicted RBP6.86□□□□□ -1.31
NEDD8-203ENST00000524927 KCNAB1Q14722 419 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 HLXQ14774 488 aaPredicted RBP6.86□□□□□ -1.31
NEDD8-203ENST00000524927 CYP2A13Q16696 494 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 ZNF750Q32MQ0 723 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 AMZ1Q400G9 498 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 C10orf120Q5SQS8 335 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 RBM20Q5T481 1227 aaKnown RBP6.86□□□□□ -1.31
NEDD8-203ENST00000524927 VWA5B1Q5TIE3 1220 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 SFRP4Q6FHJ7 346 aaPredicted RBP6.86□□□□□ -1.31
NEDD8-203ENST00000524927 TLDC1Q6P9B6 456 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 MICALCLQ6ZW33 695 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 SFR1Q86XK3 245 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 CCDC117Q8IWD4 279 aaPredicted RBP6.86□□□□□ -1.31
NEDD8-203ENST00000524927 PALM2Q8IXS6 379 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 Q8N1X5 172 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 TMEM161BQ8NDZ6 487 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 BICD1Q96G01 975 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 SECISBP2Q96T21 854 aaKnown RBP6.86□□□□□ -1.31
NEDD8-203ENST00000524927 KCNK16Q96T55 309 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 CTRCQ99895 268 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 SLX1AQ9BQ83 275 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 MSTO1Q9BUK6 570 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 RNF26Q9BY78 433 aaPredicted RBP6.86□□□□□ -1.31
NEDD8-203ENST00000524927 KLC2Q9H0B6 622 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 PCDHAC1Q9H158 963 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 FAM83DQ9H4H8 585 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 GALNT9Q9HCQ5 603 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 OSER1Q9NX31 292 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 NDRG4Q9ULP0 352 aaKnown RBP6.86□□□□□ -1.31
NEDD8-203ENST00000524927 CAPN11Q9UMQ6 739 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 ERVW-1Q9UQF0 538 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 ZANQ9Y493 2812 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 CHD3Q12873 2000 aaKnown RBP6.85□□□□□ -1.31
NEDD8-203ENST00000524927 TRGV11A0A075B6L2 103 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 TLCD2A6NGC4 264 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 FOXO6A8MYZ6 492 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 C21orf140B9A014 251 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 PROM1O43490 865 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 SRGAP2O75044 1071 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 COQ9O75208 318 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 ZFPL1O95159 310 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 CSKP41240 450 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 LIG4P49917 911 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 KRTAP1-1Q07627 177 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 DNASE1L3Q13609 305 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 SPARCL1Q14515 664 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 MPP7Q5T2T1 576 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 PIP5KL1Q5T9C9 394 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 ANKRD45Q5TZF3 282 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 SEL1L3Q68CR1 1132 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 RGS7BPQ6MZT1 257 aaPredicted RBP6.85□□□□□ -1.31
NEDD8-203ENST00000524927 Q6ZS92 163 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 CUZD1Q86UP6 607 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 SLC15A3Q8IY34 581 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 CPEB3Q8NE35 698 aaKnown RBP6.85□□□□□ -1.31
NEDD8-203ENST00000524927 DNAJB14Q8TBM8 379 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 GRHL3Q8TE85 626 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 NACC2Q96BF6 587 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 TMA16Q96EY4 203 aaKnown RBP6.85□□□□□ -1.31
NEDD8-203ENST00000524927 BOD1Q96IK1 185 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 LMLNQ96KR4 655 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 LENG8Q96PV6 779 aaPredicted RBP6.85□□□□□ -1.31
NEDD8-203ENST00000524927 C1QTNF3Q9BXJ4 246 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 SLC17A9Q9BYT1 436 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 PLA2G12AQ9BZM1 189 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 EDEM3Q9BZQ6 932 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 CXorf36Q9H7Y0 433 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 DMAP1Q9NPF5 467 aaPredicted RBP6.85□□□□□ -1.31
NEDD8-203ENST00000524927 NECTIN3Q9NQS3 549 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 PARPBPQ9NWS1 579 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 SARDHQ9UL12 918 aa6.85□□□□□ -1.31
NEDD8-203ENST00000524927 NYNRINQ9P2P1 1898 aaKnown RBP6.85□□□□□ -1.31
NEDD8-203ENST00000524927 WNK1Q9H4A3 2382 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 ATP8B3O60423 1300 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 TRGV8A0A0C4DH27 118 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 CCDC189A1A4V9 331 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 AQP12BA6NM10 295 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 ALOX15BO15296 676 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 RAD51BO15315 384 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 JRKO75564 520 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 PAK4O96013 591 aaPredicted RBP6.84□□□□□ -1.31
NEDD8-203ENST00000524927 PIGRP01833 764 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 PLA2G4BP0C869 781 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 CTSEP14091 401 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 MUTP22033 750 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms