RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ZNF718Q3SXZ3 478 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 ARMC3Q5W041 872 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 SHQ1Q6PI26 577 aaKnown RBP3.67□□□□□ -1.82
SKP1-212ENST00000523966 CORO6Q6QEF8 472 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 IL27RAQ6UWB1 636 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 LINGO4Q6UY18 593 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 GALNTL5Q7Z4T8 443 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 CDK20Q8IZL9 346 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 ARHGAP24Q8N264 748 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 RYBPQ8N488 228 aaPredicted RBP3.67□□□□□ -1.82
SKP1-212ENST00000523966 LMNTD1Q8N9Z9 388 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 C9orf106Q8NAJ2 232 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 SLC24A4Q8NFF2 622 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 SPSB1Q96BD6 273 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 ZNF354BQ96LW1 612 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 FER1L6-AS2Q96M78 137 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 C17orf77Q96MU5 243 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 RTP3Q9BQQ7 232 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 VN1R1Q9GZP7 353 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 BICC1Q9H694 974 aaKnown RBP3.67□□□□□ -1.82
SKP1-212ENST00000523966 SERINC1Q9NRX5 453 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 DONSONQ9NYP3 566 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 B3GAT1Q9P2W7 334 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 NCAPD3P42695 1498 aa3.67□□□□□ -1.82
SKP1-212ENST00000523966 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 A0A1B0GUV1 79 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 C5orf60A6NFR6 353 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 NEMP2A6NFY4 417 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 E9PI62 339 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 RNASEH1O60930 286 aaKnown RBP3.66□□□□□ -1.82
SKP1-212ENST00000523966 IGHV2-70P01814 119 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 ATP5BP06576 529 aaKnown RBP3.66□□□□□ -1.82
SKP1-212ENST00000523966 SAGP10523 405 aaPredicted RBP3.66□□□□□ -1.82
SKP1-212ENST00000523966 FGF5P12034 268 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 PSMA3P25788 255 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 GP5P40197 560 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 MNDAP41218 407 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 THOP1P52888 689 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 PHEXP78562 749 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 PPARDQ03181 441 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 KRTAP1-1Q07627 177 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 DMPKQ09013 629 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 PNRC1Q12796 327 aaPredicted RBP3.66□□□□□ -1.82
SKP1-212ENST00000523966 PPIGQ13427 754 aaKnown RBP eCLIP3.66□□□□□ -1.82
SKP1-212ENST00000523966 CUL3Q13618 768 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 KLHL26Q53HC5 615 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 TCTE1Q5JU00 501 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 PRR27Q6MZM9 219 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 SLC27A1Q6PCB7 646 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 PPP1R21Q6ZMI0 780 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 FAM47EQ6ZV65 393 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 SLC26A9Q7LBE3 791 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 TRMT1LQ7Z2T5 733 aaKnown RBP3.66□□□□□ -1.82
SKP1-212ENST00000523966 DGLUCYQ7Z3D6 616 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 SPATA21Q7Z572 469 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 PLD3Q8IV08 490 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 CEP57L1Q8IYX8 460 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 IRGQQ8WZA9 623 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 DHX58Q96C10 678 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 RMDN2Q96LZ7 410 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 FEVQ99581 238 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 CITED2Q99967 270 aaPredicted RBP3.66□□□□□ -1.82
SKP1-212ENST00000523966 RHNO1Q9BSD3 238 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 TRMT61BQ9BVS5 477 aaKnown RBP3.66□□□□□ -1.82
SKP1-212ENST00000523966 GTPBP2Q9BX10 602 aaKnown RBP3.66□□□□□ -1.82
SKP1-212ENST00000523966 PRRG4Q9BZD6 226 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 GRPEL1Q9HAV7 217 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 XAB2Q9HCS7 855 aaKnown RBP3.66□□□□□ -1.82
SKP1-212ENST00000523966 SH3GLB2Q9NR46 395 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 GKN1Q9NS71 199 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 SPHK1Q9NYA1 384 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 COQ3Q9NZJ6 369 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 ICAM5Q9UMF0 924 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 EIF4G1Q04637 1599 aaKnown RBP3.66□□□□□ -1.82
SKP1-212ENST00000523966 TAF1P21675 1872 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 CKAP5Q14008 2032 aa3.66□□□□□ -1.82
SKP1-212ENST00000523966 BAZ1BQ9UIG0 1483 aaKnown RBP3.66□□□□□ -1.82
SKP1-212ENST00000523966 EVPLQ92817 2033 aa3.65□□□□□ -1.82
SKP1-212ENST00000523966 FAM172BPA6NC97 362 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 TMEM221A6NGB7 291 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 ANKRD61A6NGH8 418 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 DUXAA6NLW8 204 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 ANXA2P2A6NMY6 339 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 XPNPEP2O43895 674 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 PRKNO60260 465 aaPredicted RBP3.65□□□□□ -1.83
SKP1-212ENST00000523966 PRKRAO75569 313 aaKnown RBP3.65□□□□□ -1.83
SKP1-212ENST00000523966 TOMM70O94826 608 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 BMXP51813 675 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 MCMDC2Q4G0Z9 681 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 SFMBT2Q5VUG0 894 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 MOXD1Q6UVY6 613 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 ARHGAP22Q7Z5H3 698 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 ANKRD23Q86SG2 305 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 TLK2Q86UE8 772 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 NUDT13Q86X67 352 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 CCAR2Q8N163 923 aaKnown RBP3.65□□□□□ -1.83
SKP1-212ENST00000523966 TRIML1Q8N9V2 468 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 KBTBD3Q8NAB2 608 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 Q8NFD4 153 aa3.65□□□□□ -1.83
SKP1-212ENST00000523966 OR2T12Q8NG77 320 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms