RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 ZNF704Q6ZNC4 412 aaPredicted RBP4.74□□□□□ -1.65
SKP1-211ENST00000523359 C15orf52Q6ZUT6 534 aaKnown RBP4.74□□□□□ -1.65
SKP1-211ENST00000523359 Q75L30 129 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 LPCAT2Q7L5N7 544 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 C10orf53Q8N6V4 93 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 SYT2Q8N9I0 419 aaPredicted RBP4.74□□□□□ -1.65
SKP1-211ENST00000523359 DRAXINQ8NBI3 349 aaPredicted RBP4.74□□□□□ -1.65
SKP1-211ENST00000523359 OR52I2Q8NH67 350 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 FIBINQ8TAL6 211 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 ATP6V0A1Q93050 837 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 PHF21AQ96BD5 680 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 PGAP3Q96FM1 320 aaPredicted RBP4.74□□□□□ -1.65
SKP1-211ENST00000523359 RUNDC3BQ96NL0 473 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 IL17FQ96PD4 163 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 DUX5Q96PT3 197 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 TCHPQ9BT92 498 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 RAB6CQ9H0N0 254 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 SEMA6AQ9H2E6 1030 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 SLCO5A1Q9H2Y9 848 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 KCNK15Q9H427 330 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 DDX31Q9H8H2 851 aaKnown RBP4.74□□□□□ -1.65
SKP1-211ENST00000523359 TCP11L1Q9NUJ3 509 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 ACTR3BQ9P1U1 418 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 MARCH4Q9P2E8 410 aaPredicted RBP4.74□□□□□ -1.65
SKP1-211ENST00000523359 DNAJB9Q9UBS3 223 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 CFAP45Q9UL16 551 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 PPIEQ9UNP9 301 aaKnown RBP4.74□□□□□ -1.65
SKP1-211ENST00000523359 LIPT1Q9Y234 373 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 NSD2O96028 1365 aa4.74□□□□□ -1.65
SKP1-211ENST00000523359 SCN5AQ14524 2016 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 ZCWPW2A0A1B0GU75 182 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 hCG_1809904A0A1W2PP81 198 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 A0A1W2PPE2 198 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 A0A1W2PR64 198 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 CLRN2A0PK11 232 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 OR2M5A3KFT3 312 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 A6NL46 340 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 PRAC2D3DTV9 90 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 EIF3DO15371 548 aaKnown RBP eCLIP4.73□□□□□ -1.65
SKP1-211ENST00000523359 RIPK2O43353 540 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 NOL3O60936 208 aaKnown RBP4.73□□□□□ -1.65
SKP1-211ENST00000523359 WDR1O75083 606 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 TSC22D2O75157 780 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 E2F6O75461 281 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 WISP2O76076 250 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 PNPP00491 289 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 FGF3P11487 239 aaPredicted RBP4.73□□□□□ -1.65
SKP1-211ENST00000523359 SKILP12757 684 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 ARSEP51690 589 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 FUT6P51993 359 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 SNRPEP62304 92 aaKnown RBP4.73□□□□□ -1.65
SKP1-211ENST00000523359 CCNA1P78396 465 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 PRPF4BQ13523 1007 aaKnown RBP4.73□□□□□ -1.65
SKP1-211ENST00000523359 TOR1AIP1Q5JTV8 583 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 STXBP5Q5T5C0 1151 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 ALS2CLQ60I27 953 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 DHRS7BQ6IAN0 325 aaPredicted RBP4.73□□□□□ -1.65
SKP1-211ENST00000523359 TUBA1AQ71U36 451 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 CCDC186Q7Z3E2 898 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 METTL23Q86XA0 190 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 GUF1Q8N442 669 aaKnown RBP4.73□□□□□ -1.65
SKP1-211ENST00000523359 FBXO39Q8N4B4 442 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 HDDC3Q8N4P3 179 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 C1orf52Q8N6N3 182 aaKnown RBP4.73□□□□□ -1.65
SKP1-211ENST00000523359 SPATA20Q8TB22 786 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 LNX1Q8TBB1 728 aaPredicted RBP4.73□□□□□ -1.65
SKP1-211ENST00000523359 SECTM1Q8WVN6 248 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 SORCS1Q8WY21 1168 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 LPGAT1Q92604 370 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 TUBA1CQ9BQE3 449 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 NEURL2Q9BR09 285 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 MRPL1Q9BYD6 325 aaKnown RBP4.73□□□□□ -1.65
SKP1-211ENST00000523359 HSD3B7Q9H2F3 369 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 THAP9Q9H5L6 903 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 RBM28Q9NW13 759 aaKnown RBP4.73□□□□□ -1.65
SKP1-211ENST00000523359 CGNQ9P2M7 1197 aaKnown RBP4.73□□□□□ -1.65
SKP1-211ENST00000523359 POU2F3Q9UKI9 436 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 ITM2BQ9Y287 266 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 DLGAP4Q9Y2H0 992 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 PCDHAC2Q9Y5I4 1007 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 AP1M2Q9Y6Q5 423 aa4.73□□□□□ -1.65
SKP1-211ENST00000523359 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.73□□□□□ -1.65
SKP1-211ENST00000523359 MAGEB17A8MXT2 336 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 H0YAE9 185 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 H0YIN7 160 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 TULP2O00295 520 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 ACOT8O14734 319 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 CREG1O75629 220 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 GCNT3O95395 438 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 TPOP07202 933 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 NEFHP12036 1026 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 CD9P21926 228 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 ADSSP30520 456 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 HSPA1LP34931 641 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 IL15P40933 162 aaPredicted RBP4.72□□□□□ -1.65
SKP1-211ENST00000523359 ACAA2P42765 397 aaKnown RBP4.72□□□□□ -1.65
SKP1-211ENST00000523359 SULT1E1P49888 294 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 LIG4P49917 911 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 HNMTP50135 292 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 NFE2L1Q14494 772 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms