RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 POLHQ9Y253 713 aa15.71■□□□□ 0.11
CLN8-206ENST00000523237 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.7■□□□□ 0.1
CLN8-206ENST00000523237 IQCF5A8MTL0 148 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 GPC4O75487 556 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 NDUFS3O75489 264 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 RPN2P04844 631 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 PVRP15151 417 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 UGT2B7P16662 529 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 CYP2A7P20853 494 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 AOAHP28039 575 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 PTPN4P29074 926 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 NFKB2Q00653 900 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 ABRQ12979 859 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 GPS1Q13098 491 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 GPS2Q13227 327 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 LRRC6Q86X45 466 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 RASGEF1CQ8N431 466 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 OTUD6BQ8N6M0 293 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 OR1L3Q8NH93 324 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 LKAAEAR1Q8TD35 194 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 N4BP2L2Q92802 583 aaPredicted RBP15.7■□□□□ 0.1
CLN8-206ENST00000523237 MR1Q95460 341 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 MAGOHBQ96A72 148 aaKnown RBP15.7■□□□□ 0.1
CLN8-206ENST00000523237 CLIP3Q96DZ5 547 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 OR2A14Q96R47 310 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 NAP1L3Q99457 506 aaPredicted RBP15.7■□□□□ 0.1
CLN8-206ENST00000523237 P2RY12Q9H244 342 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 AKIRIN1Q9H9L7 192 aaPredicted RBP15.7■□□□□ 0.1
CLN8-206ENST00000523237 SYBUQ9NX95 663 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 CDYLQ9Y232 598 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 KCNMB2Q9Y691 235 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 SPTBP11277 2137 aa15.7■□□□□ 0.1
CLN8-206ENST00000523237 TCRBV7S3A2A0A539 114 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 CDC14CA4D256 554 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 MEN1O00255 615 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 KPNA5O15131 536 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 PFDN6O15212 129 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 SNRNP200O75643 2136 aaKnown RBP15.69■□□□□ 0.1
CLN8-206ENST00000523237 VAPBO95292 243 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 KRT14P02533 472 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 FURINP09958 794 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 TPBGLP0DKB5 382 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 MAGEA6P43360 314 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 VPS41P49754 854 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 TERF1P54274 439 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 KCNJ11Q14654 390 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 KIR2DS3Q14952 304 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 IZUMO3Q5VZ72 239 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 ARMC3Q5W041 872 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 MRNIPQ6NTE8 343 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 TTC27Q6P3X3 843 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 UNC5DQ6UXZ4 953 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 ZNF517Q6ZMY9 492 aaPredicted RBP15.69■□□□□ 0.1
CLN8-206ENST00000523237 ATG14Q6ZNE5 492 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 CDHR3Q6ZTQ4 885 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 SDCCAG8Q86SQ7 713 aaPredicted RBP15.69■□□□□ 0.1
CLN8-206ENST00000523237 SYVN1Q86TM6 617 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 TRIM73Q86UV7 250 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 VRK3Q8IV63 474 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 KRT222Q8N1A0 295 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 C19orf47Q8N9M1 422 aaKnown RBP15.69■□□□□ 0.1
CLN8-206ENST00000523237 SLC38A9Q8NBW4 561 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 C9orf43Q8TAL5 461 aaPredicted RBP15.69■□□□□ 0.1
CLN8-206ENST00000523237 GSDMBQ8TAX9 411 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 MFSD3Q96ES6 412 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 TCTN2Q96GX1 697 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 SLC7A5P2Q9GIP4 190 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 SPHK1Q9NYA1 384 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 PLAGL1Q9UM63 463 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 SOX13Q9UN79 622 aa15.69■□□□□ 0.1
CLN8-206ENST00000523237 FARSAQ9Y285 508 aaKnown RBP15.69■□□□□ 0.1
CLN8-206ENST00000523237 TLN1Q9Y490 2541 aaKnown RBP15.68■□□□□ 0.1
CLN8-206ENST00000523237 A0A0J9YY10 115 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 ISM1B1AKI9 464 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 E7EQ34 232 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 SUV39H1O43463 412 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 SLCO2B1O94956 709 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 RPS3P23396 243 aaKnown RBP eCLIP15.68■□□□□ 0.1
CLN8-206ENST00000523237 ARNTP27540 789 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 RAB28P51157 221 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 ITGA1P56199 1179 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 KCTD19Q17RG1 926 aaPredicted RBP15.68■□□□□ 0.1
CLN8-206ENST00000523237 ZNF789Q5FWF6 425 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 PLEKHS1Q5SXH7 462 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 RNF187Q5TA31 235 aaPredicted RBP15.68■□□□□ 0.1
CLN8-206ENST00000523237 PRAMEF17Q5VTA0 474 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 CES3Q6UWW8 571 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 DCUN1D3Q8IWE4 304 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 GPR135Q8IZ08 494 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 DSELQ8IZU8 1212 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 CFAP61Q8NHU2 1237 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 MS4A14Q96JA4 679 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 RUFY1Q96T51 708 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 CHST8Q9H2A9 424 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 ACTR5Q9H9F9 607 aaPredicted RBP15.68■□□□□ 0.1
CLN8-206ENST00000523237 GRPEL1Q9HAV7 217 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 SAMD15Q9P1V8 674 aa15.68■□□□□ 0.1
CLN8-206ENST00000523237 PGRMC1O00264 195 aaKnown RBP15.67■□□□□ 0.1
CLN8-206ENST00000523237 HBQ1P09105 142 aa15.67■□□□□ 0.1
CLN8-206ENST00000523237 PAMP19021 973 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms