RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 DRG1Q9Y295 367 aaKnown RBP20.03■□□□□ 0.8
SDCBP-209ENST00000522243 MKRN2OSH3BPM6 223 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 CEP104O60308 925 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 RFPL1O75677 317 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 RECKO95980 971 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 CHRM5P08912 532 aaPredicted RBP20.02■□□□□ 0.8
SDCBP-209ENST00000522243 CXCR5P32302 372 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 TERF1P54274 439 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 HSPA14Q0VDF9 509 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 UGT8Q16880 541 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 DEFB110Q30KQ9 67 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 PTCHD3Q3KNS1 767 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 DRICH1Q6PGQ1 229 aaPredicted RBP20.02■□□□□ 0.8
SDCBP-209ENST00000522243 ZNF517Q6ZMY9 492 aaPredicted RBP20.02■□□□□ 0.8
SDCBP-209ENST00000522243 LRRC8AQ8IWT6 810 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 ENDOVQ8N8Q3 282 aaKnown RBP20.02■□□□□ 0.8
SDCBP-209ENST00000522243 LMNTD1Q8N9Z9 388 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 LRFN5Q96NI6 719 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 OR2A14Q96R47 310 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 AP1M1Q9BXS5 423 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 CATSPERZQ9NTU4 200 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 PCMTD2Q9NV79 361 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 MARCH4Q9P2E8 410 aaPredicted RBP20.02■□□□□ 0.8
SDCBP-209ENST00000522243 CIDEBQ9UHD4 219 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 POLG2Q9UHN1 485 aa20.02■□□□□ 0.8
SDCBP-209ENST00000522243 ISM1B1AKI9 464 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 E7EQ34 232 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 F8W8V4 182 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 HCRTR1O43613 425 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 ATXN8OSP0DMR3 200 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 NMBRP28336 390 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 RORAP35398 523 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 PPARGP37231 505 aaPredicted RBP20.01■□□□□ 0.79
SDCBP-209ENST00000522243 PMS2P54278 862 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 ITGA1P56199 1179 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 PLOD1Q02809 727 aaPredicted RBP20.01■□□□□ 0.79
SDCBP-209ENST00000522243 CHAF1BQ13112 559 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 ZIC1Q15915 447 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 IZUMO3Q5VZ72 239 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 CPZQ66K79 652 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 ZNF662Q6ZS27 426 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 FAM20CQ8IXL6 584 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 C19orf47Q8N9M1 422 aaKnown RBP20.01■□□□□ 0.79
SDCBP-209ENST00000522243 CFAP61Q8NHU2 1237 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 FLVCR1-AS1Q8TAF5 88 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 N4BP2L2Q92802 583 aaPredicted RBP20.01■□□□□ 0.79
SDCBP-209ENST00000522243 CARD6Q9BX69 1037 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 EIF2B3Q9NR50 452 aaKnown RBP20.01■□□□□ 0.79
SDCBP-209ENST00000522243 ANAPC2Q9UJX6 822 aa20.01■□□□□ 0.79
SDCBP-209ENST00000522243 TNRC6AQ8NDV7 1962 aaKnown RBP20.01■□□□□ 0.79
SDCBP-209ENST00000522243 ARGFXA6NJG6 315 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 CD3EAPO15446 510 aaKnown RBP20■□□□□ 0.79
SDCBP-209ENST00000522243 ZNF749O43361 778 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 MSL3P1P0C860 447 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 CASRP41180 1078 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 CCZ1BP86790 482 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 CCZ1P86791 482 aaPredicted RBP20■□□□□ 0.79
SDCBP-209ENST00000522243 CES3Q6UWW8 571 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 SYTL1Q8IYJ3 562 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 SLC22A15Q8IZD6 547 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 MAIP1Q8WWC4 291 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 SEC14L1Q92503 715 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 PEX13Q92968 403 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 SGSM3Q96HU1 749 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 SPRTNQ9H040 489 aaPredicted RBP20■□□□□ 0.79
SDCBP-209ENST00000522243 TTC7AQ9ULT0 858 aaPredicted RBP20■□□□□ 0.79
SDCBP-209ENST00000522243 SNX7Q9UNH6 387 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 CDYLQ9Y232 598 aa20■□□□□ 0.79
SDCBP-209ENST00000522243 SNRNP200O75643 2136 aaKnown RBP20■□□□□ 0.79
SDCBP-209ENST00000522243 A0A0J9YY10 115 aa19.99■□□□□ 0.79
SDCBP-209ENST00000522243 MGAT1P26572 445 aa19.99■□□□□ 0.79
SDCBP-209ENST00000522243 PEBP1P30086 187 aaKnown RBP19.99■□□□□ 0.79
SDCBP-209ENST00000522243 TRIP13Q15645 432 aaPredicted RBP19.99■□□□□ 0.79
SDCBP-209ENST00000522243 IGFBP7Q16270 282 aa19.99■□□□□ 0.79
SDCBP-209ENST00000522243 DNAJC21Q5F1R6 531 aaKnown RBP19.99■□□□□ 0.79
SDCBP-209ENST00000522243 AARS2Q5JTZ9 985 aaKnown RBP19.99■□□□□ 0.79
SDCBP-209ENST00000522243 TCTN3Q6NUS6 607 aa19.99■□□□□ 0.79
SDCBP-209ENST00000522243 FAM198BQ6UWH4 519 aa19.99■□□□□ 0.79
SDCBP-209ENST00000522243 APLFQ8IW19 511 aaPredicted RBP19.99■□□□□ 0.79
SDCBP-209ENST00000522243 C2orf73Q8N5S3 287 aaPredicted RBP19.99■□□□□ 0.79
SDCBP-209ENST00000522243 TRIM58Q8NG06 486 aa19.99■□□□□ 0.79
SDCBP-209ENST00000522243 THAP4Q8WY91 577 aa19.99■□□□□ 0.79
SDCBP-209ENST00000522243 TSSK1BQ9BXA7 367 aa19.99■□□□□ 0.79
SDCBP-209ENST00000522243 TREX1Q9NSU2 369 aa19.99■□□□□ 0.79
SDCBP-209ENST00000522243 OR6C2Q9NZP2 312 aa19.99■□□□□ 0.79
SDCBP-209ENST00000522243 BFARQ9NZS9 450 aa19.99■□□□□ 0.79
SDCBP-209ENST00000522243 ZKSCAN5Q9Y2L8 839 aa19.99■□□□□ 0.79
SDCBP-209ENST00000522243 TCRBV7S3A2A0A539 114 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 PRMT5O14744 637 aaPredicted RBP19.98■□□□□ 0.79
SDCBP-209ENST00000522243 GPC4O75487 556 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 PDGFAP04085 211 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 APOA4P06727 396 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 CAPN1P07384 714 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 CTSBP07858 339 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 RAB40ALP0C0E4 278 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 PTGIRP43119 386 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 GABRA4P48169 554 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 NPY2RP49146 381 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 KLRB1Q12918 225 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 PTRHD1Q6GMV3 140 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms