RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 ARMCX4Q5H9R4 360 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 SPANXN3Q5MJ09 141 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 GPR139Q6DWJ6 353 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 B3GNT9Q6UX72 402 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 GALNT10Q86SR1 603 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 TMEM161BQ8NDZ6 487 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 SGTBQ96EQ0 304 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 TMEM74Q96NL1 305 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 GPR78Q96P69 363 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 KCNS3Q9BQ31 491 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 C11orf54Q9H0W9 315 aaPredicted RBP11.82□□□□□ -0.52
SPIDR-217ENST00000522117 SCN3BQ9NY72 215 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 TINAGQ9UJW2 476 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 SLC39A10Q9ULF5 831 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 NUPL2O15504 423 aaKnown RBP11.81□□□□□ -0.52
SPIDR-217ENST00000522117 GMDSO60547 372 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 TULP3O75386 442 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 CSF2P04141 144 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 POLBP06746 335 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 PRKACGP22612 351 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 KIR2DL3P43628 341 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 PPP3CCP48454 512 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 CXCR4P61073 352 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 GPR68Q15743 365 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 ZNF792Q3KQV3 632 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 TRIM60Q495X7 471 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 CLLU1Q5K131 121 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 BSPRYQ5W0U4 402 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 SMYD5Q6GMV2 418 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 DENND1BQ6P3S1 775 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 RPS27LQ71UM5 84 aaKnown RBP11.81□□□□□ -0.52
SPIDR-217ENST00000522117 SLC46A3Q7Z3Q1 461 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 PIWIL4Q7Z3Z4 852 aaKnown RBP11.81□□□□□ -0.52
SPIDR-217ENST00000522117 TMEM179BQ7Z7N9 219 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 P3H2Q8IVL5 708 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 CDKL3Q8IVW4 592 aaPredicted RBP11.81□□□□□ -0.52
SPIDR-217ENST00000522117 TFAP2BQ92481 460 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 ATOH1Q92858 354 aaPredicted RBP11.81□□□□□ -0.52
SPIDR-217ENST00000522117 FAM149B1Q96BN6 582 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 SIPA1Q96FS4 1042 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 WBP1Q96G27 269 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 C3orf30Q96M34 536 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 LINC00052Q96N35 136 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 PPP1R2P1Q96PQ5 205 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 NAT9Q9BTE0 207 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 OR51E2Q9H255 320 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 SLC6A15Q9H2J7 730 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 MRM3Q9HC36 420 aaKnown RBP11.81□□□□□ -0.52
SPIDR-217ENST00000522117 PCDHB16Q9NRJ7 776 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 GPRC5BQ9NZH0 403 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 ACOT9Q9Y305 439 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 PCDHB5Q9Y5E4 795 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 ALG5Q9Y673 324 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 LOC100506127A0A0U1RQW1 187 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 CLRN2A0PK11 232 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 CHURC1-FNTBB4DL54 471 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 ERN1O75460 977 aaKnown RBP11.81□□□□□ -0.52
SPIDR-217ENST00000522117 RFPL3O75679 317 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 ALDH1A1P00352 501 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 SLC35E2BP0CK96 405 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 SLC2A3P11169 496 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 HPGDP15428 266 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 ZP3P21754 424 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 CPN2P22792 545 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 HTR1EP28566 365 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 RPL35P42766 123 aaKnown RBP11.81□□□□□ -0.52
SPIDR-217ENST00000522117 EEFSECP57772 596 aaKnown RBP11.81□□□□□ -0.52
SPIDR-217ENST00000522117 ERVFC1P60507 584 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 RAC1P63000 192 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 GRIK2Q13002 908 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 SSPNQ14714 243 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 GPR19Q15760 415 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 FUT11Q495W5 492 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 PROSER1Q86XN7 944 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 RASAL3Q86YV0 1011 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 OR7G3Q8NG95 312 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 YIPF5Q969M3 257 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 VPS39Q96JC1 886 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 SRRQ9GZT4 340 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 MS4A7Q9GZW8 240 aaPredicted RBP11.81□□□□□ -0.52
SPIDR-217ENST00000522117 ZCCHC4Q9H5U6 513 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 COA4Q9NYJ1 87 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 MAPRE3Q9UPY8 281 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 PRKAB1Q9Y478 270 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 NRXN2Q9P2S2 1712 aa11.81□□□□□ -0.52
SPIDR-217ENST00000522117 KHNYNO15037 678 aaKnown RBP11.8□□□□□ -0.52
SPIDR-217ENST00000522117 MRPS14O60783 128 aaKnown RBP11.8□□□□□ -0.52
SPIDR-217ENST00000522117 ARIH2O95376 493 aa11.8□□□□□ -0.52
SPIDR-217ENST00000522117 ITGAMP11215 1152 aa11.8□□□□□ -0.52
SPIDR-217ENST00000522117 AZGP1P25311 298 aaKnown RBP11.8□□□□□ -0.52
SPIDR-217ENST00000522117 SDC4P31431 198 aa11.8□□□□□ -0.52
SPIDR-217ENST00000522117 GNALP38405 381 aa11.8□□□□□ -0.52
SPIDR-217ENST00000522117 KCNC1P48547 511 aa11.8□□□□□ -0.52
SPIDR-217ENST00000522117 MAPKAPK2P49137 400 aa11.8□□□□□ -0.52
SPIDR-217ENST00000522117 RARRES1P49788 294 aa11.8□□□□□ -0.52
SPIDR-217ENST00000522117 RPP38P78345 283 aaKnown RBP11.8□□□□□ -0.52
SPIDR-217ENST00000522117 SP2Q02086 613 aa11.8□□□□□ -0.52
SPIDR-217ENST00000522117 PPP1R8Q12972 351 aaKnown RBP11.8□□□□□ -0.52
SPIDR-217ENST00000522117 FLYWCH1Q4VC44 716 aa11.8□□□□□ -0.52
SPIDR-217ENST00000522117 FAM183BPQ6ZVS7 135 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms