RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 TUBB4BP68371 445 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 ABHD18Q0P651 414 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 PRKG2Q13237 762 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 TUBB3Q13509 450 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 TUBB2AQ13885 445 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 CRYMQ14894 314 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 KYNUQ16719 465 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 ARHGAP40Q5TG30 622 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 HIBCHQ6NVY1 386 aaPredicted RBP12.39□□□□□ -0.43
CLCN3-210ENST00000515420 NAPRTQ6XQN6 538 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 VRK3Q8IV63 474 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 PDIK1LQ8N165 341 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 KRT222Q8N1A0 295 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 ESX1Q8N693 406 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 IL22RA1Q8N6P7 574 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 ZSCAN1Q8NBB4 408 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 WBP1Q96G27 269 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 SNF8Q96H20 258 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 EBNA1BP2Q99848 306 aaKnown RBP12.39□□□□□ -0.43
CLCN3-210ENST00000515420 TRIM56Q9BRZ2 755 aaKnown RBP12.39□□□□□ -0.43
CLCN3-210ENST00000515420 EFHD1Q9BUP0 239 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 TUBB2BQ9BVA1 445 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 RAB11FIP5Q9BXF6 653 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 ULBP3Q9BZM4 244 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 CHRNA10Q9GZZ6 450 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 KLHL42Q9P2K6 505 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 RARRES3Q9UL19 164 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 IGSF10Q6WRI0 2623 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 E5RI56 91 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 ERVH48-1M5A8F1 160 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 TTI1O43156 1089 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 EFSO43281 561 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 MAP3K7O43318 606 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 MT-ND3P03897 115 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 CHRM5P08912 532 aaPredicted RBP12.38□□□□□ -0.43
CLCN3-210ENST00000515420 TPBGLP0DKB5 382 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 FOLR1P15328 257 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 PKLRP30613 574 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 FMO4P31512 558 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 CCNFP41002 786 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 RAB28P51157 221 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 CSE1LP55060 971 aaKnown RBP12.38□□□□□ -0.43
CLCN3-210ENST00000515420 CBLBQ13191 982 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 KIR2DS3Q14952 304 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 SPANXN3Q5MJ09 141 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 TTC23LQ6PF05 361 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 SPESP1Q6UW49 350 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 UNC5AQ6ZN44 842 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 GALNT7Q86SF2 657 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 KCNMB4Q86W47 210 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 RASGRP3Q8IV61 690 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 BBOF1Q8ND07 529 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 MAGEC3Q8TD91 643 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 KCNJ9Q92806 393 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 KIAA1143Q96AT1 154 aaPredicted RBP12.38□□□□□ -0.43
CLCN3-210ENST00000515420 FOPNLQ96NB1 174 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 CCDC68Q9H2F9 335 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 FGF21Q9NSA1 209 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 C20orf96Q9NUD7 363 aaPredicted RBP12.38□□□□□ -0.43
CLCN3-210ENST00000515420 SOHLH2Q9NX45 425 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 ACTR10Q9NZ32 417 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 CRYL1Q9Y2S2 319 aa12.38□□□□□ -0.43
CLCN3-210ENST00000515420 TDRKHQ9Y2W6 561 aaKnown RBP12.38□□□□□ -0.43
CLCN3-210ENST00000515420 SNRNP200O75643 2136 aaKnown RBP12.38□□□□□ -0.43
CLCN3-210ENST00000515420 FAM187AA6NFU0 413 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 EFCAB8A8MWE9 144 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 TK2O00142 265 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 NIPSNAP2O75323 286 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 SPAG6O75602 509 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 FKBP9O95302 570 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 MATN4O95460 622 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 EBLN1P0CF75 366 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 STAT5AP42229 794 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 SLC1A2P43004 574 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 ARL4CP56559 192 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 DHX9Q08211 1270 aaKnown RBP12.37□□□□□ -0.43
CLCN3-210ENST00000515420 FRG1Q14331 258 aaKnown RBP12.37□□□□□ -0.43
CLCN3-210ENST00000515420 HIF1AQ16665 826 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 SLC5A12Q1EHB4 618 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 TTLL9Q3SXZ7 439 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 KIAA0408Q6ZU52 694 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 NEK10Q6ZWH5 1172 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 MAATS1Q7Z4T9 603 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 DENND6AQ8IWF6 608 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 CNTN4Q8IWV2 1026 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 ZBTB2Q8N680 514 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 SPATA4Q8NEY3 305 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 RAD51AP1Q96B01 352 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 SLC22A18Q96BI1 424 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 SLC45A3Q96JT2 553 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 TRAPPC9Q96Q05 1148 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 OR2A14Q96R47 310 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 KRT12Q99456 494 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 TRIM51Q9BSJ1 452 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 MENTQ9BUN1 341 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 FAM117AQ9C073 453 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 XKR8Q9H6D3 395 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 FANCEQ9HB96 536 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 IL1RAPL1Q9NZN1 696 aa12.37□□□□□ -0.43
CLCN3-210ENST00000515420 FBXO5Q9UKT4 447 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms