RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 CACNB4O00305 520 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 CDC7O00311 574 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 MATN2O00339 956 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 PLK4O00444 970 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 TNFRSF10CO14798 259 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 GIPC1O14908 333 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 HDAC3O15379 428 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 FFAR2O15552 330 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 RRP8O43159 456 aaKnown RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 TNFSF14O43557 240 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 HYAL3O43820 417 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 PSIP1O75475 530 aaKnown RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 SUPT3HO75486 399 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 CATP04040 527 aaKnown RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 RPN2P04844 631 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 ANXA5P08758 320 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 PCSK2P16519 638 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 HNRNPA2B1P22626 353 aaKnown RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 RPL14P50914 215 aaKnown RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 CLCNKAP51800 687 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 PKNOX1P55347 436 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 C21orf59P57076 290 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 PCDH1Q08174 1060 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 LCP2Q13094 533 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 IRF4Q15306 451 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 TBCCQ15814 346 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 KHDC1Q4VXA5 237 aaKnown RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 ARL13AQ5H913 290 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 SH2D4BQ5SQS7 431 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 METTL21CQ5VZV1 264 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 CES4AQ5XG92 561 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 SEL1L3Q68CR1 1132 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 ANKS6Q68DC2 871 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 TMEM220Q6QAJ8 160 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 UNC5DQ6UXZ4 953 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 NAPRTQ6XQN6 538 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 ZCCHC23Q6ZST2 131 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 TMPRSS12Q86WS5 348 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 SPATA6LQ8N4H0 392 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 PTGR2Q8N8N7 351 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 MAGEC3Q8TD91 643 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 MCOLN3Q8TDD5 553 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 ZNF483Q8TF39 744 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 SGF29Q96ES7 293 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 CCDC97Q96F63 343 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 GSTO2Q9H4Y5 243 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 TM7SF3Q9NS93 570 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 TMEM74BQ9NUR3 256 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 ATXN10Q9UBB4 475 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 MBD1Q9UIS9 605 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 PTBP2Q9UKA9 531 aaKnown RBP8.9□□□□□ -0.98
NR1I3-228ENST00000511676 CYP8B1Q9UNU6 501 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 SLC17A4Q9Y2C5 497 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 HS3ST3A1Q9Y663 406 aa8.9□□□□□ -0.98
NR1I3-228ENST00000511676 ABCA7Q8IZY2 2146 aa8.9□□□□□ -0.99
NR1I3-228ENST00000511676 CHD8Q9HCK8 2581 aa8.9□□□□□ -0.99
NR1I3-228ENST00000511676 TBC1D3DA0A087WVF3 549 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 TBC1D3IA0A087WXS9 549 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 TBC1D3EA0A087X179 549 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 TBC1D3KA0A087X1G2 549 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 TBC1D3FA6NER0 549 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-228ENST00000511676 ANTXRLA6NF34 631 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 TBC1D3LB9A6J9 549 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 PRAMEF26H0Y7S4 382 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 K7ESM1 405 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 UBXN8O00124 270 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 FPGTO14772 594 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 SLC22A2O15244 555 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 INPP4BO15327 924 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 HNRNPCL1O60812 293 aaKnown RBP8.89□□□□□ -0.99
NR1I3-228ENST00000511676 KATNA1O75449 491 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 SEMA4FO95754 770 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 PCCBP05166 539 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 HIST1H2AGP0C0S8 130 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-228ENST00000511676 TBC1D3HP0C7X1 549 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 FTH1P19P0C7X4 201 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 HIST1H2ADP20671 130 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 AKT2P31751 481 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 IGFALSP35858 605 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 GMPRP36959 345 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 KCNC1P48547 511 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 ARRB1P49407 418 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-228ENST00000511676 CCT8P50990 548 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 ARFIP2P53365 341 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 PGGT1BP53609 377 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 CTSCP53634 463 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 INHBCP55103 352 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 CTBSQ01459 385 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 ZNF33BQ06732 778 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 HSPA14Q0VDF9 509 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 LRP8Q14114 963 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 BOP1Q14137 746 aaKnown RBP8.89□□□□□ -0.99
NR1I3-228ENST00000511676 FGL2Q14314 439 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 INPP5AQ14642 412 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 PFKFB4Q16877 469 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 TBC1D3GQ6DHY5 549 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 TBC1D3CQ6IPX1 549 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 TMPRSS7Q7RTY8 843 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 LRRC70Q7Z2Q7 622 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 C11orf96Q7Z7L8 435 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms