RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 PPP1R21Q6ZMI0 780 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 ZBTB49Q6ZSB9 765 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 TMPRSS11FQ6ZWK6 438 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 TMPRSS11BQ86T26 416 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 FAM114A1Q8IWE2 563 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 CTAGE4Q8IX94 777 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 CRYBG2Q8N1P7 616 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 OR5M8Q8NGP6 311 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 PPP4R1Q8TF05 950 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 DAZLQ92904 295 aaKnown RBP2.99□□□□□ -1.93
CHD1-207ENST00000511628 HDAC11Q96DB2 347 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 ARSGQ96EG1 525 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 LINGO1Q96FE5 620 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 ZNF558Q96NG5 402 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 ADPGKQ9BRR6 497 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 SLC25A23Q9BV35 468 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 ALDH8A1Q9H2A2 487 aaPredicted RBP2.99□□□□□ -1.93
CHD1-207ENST00000511628 Q9N2K0 584 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 KLHL1Q9NR64 748 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 TCP11L1Q9NUJ3 509 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 DDX43Q9NXZ2 648 aaKnown RBP2.99□□□□□ -1.93
CHD1-207ENST00000511628 SLC24A2Q9UI40 661 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 YIPF1Q9Y548 306 aa2.99□□□□□ -1.93
CHD1-207ENST00000511628 SPIN1Q9Y657 262 aaPredicted RBP2.99□□□□□ -1.93
CHD1-207ENST00000511628 SOS1Q07889 1333 aaPredicted RBP2.98□□□□□ -1.93
CHD1-207ENST00000511628 IGLV5-45A0A087WSX0 123 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 ANTXRLA6NF34 631 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 MEIS2O14770 477 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 CLIC2O15247 247 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 GPR137BO60478 399 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 SYNCRIPO60506 623 aaKnown RBP2.98□□□□□ -1.93
CHD1-207ENST00000511628 APOHP02749 345 aaPredicted RBP2.98□□□□□ -1.93
CHD1-207ENST00000511628 LIPFP07098 398 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 OR2T7P0C7T2 308 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 ERCC2P18074 760 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 PTPN3P26045 913 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 TLX1P31314 330 aaPredicted RBP2.98□□□□□ -1.93
CHD1-207ENST00000511628 GP5P40197 560 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 PRKCIP41743 596 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 GLIPR1P48060 266 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 LINC01547P58512 204 aaPredicted RBP2.98□□□□□ -1.93
CHD1-207ENST00000511628 PMP22Q01453 160 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 RBPJQ06330 500 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 MZT1Q08AG7 82 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 HSPB3Q12988 150 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 PPIGQ13427 754 aaKnown RBP eCLIP2.98□□□□□ -1.932e-6■■■■□ 23.4
CHD1-207ENST00000511628 ASPRV1Q53RT3 343 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 MPP7Q5T2T1 576 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 SFMBT2Q5VUG0 894 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 SLC35E4Q6ICL7 350 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 SLC27A1Q6PCB7 646 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 ZNF704Q6ZNC4 412 aaPredicted RBP2.98□□□□□ -1.93
CHD1-207ENST00000511628 PLEKHM3Q6ZWE6 761 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 PTOV1Q86YD1 416 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 CIARTQ8N365 385 aaPredicted RBP2.98□□□□□ -1.93
CHD1-207ENST00000511628 ANKRD13CQ8N6S4 541 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 WDSUB1Q8N9V3 476 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 OR10V1Q8NGI7 309 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 EXD1Q8NHP7 514 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 GOT1L1Q8NHS2 421 aaPredicted RBP2.98□□□□□ -1.93
CHD1-207ENST00000511628 OLIG1Q8TAK6 271 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 ALG14Q96F25 216 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 ST6GAL2Q96JF0 529 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 MUS81Q96NY9 551 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 FZD8Q9H461 694 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 PELI2Q9HAT8 420 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 IL17BQ9UHF5 180 aa2.98□□□□□ -1.93
CHD1-207ENST00000511628 NOL7Q9UMY1 257 aaKnown RBP2.98□□□□□ -1.93
CHD1-207ENST00000511628 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.98□□□□□ -1.931e-7■■□□□ 11.7
CHD1-207ENST00000511628 FLT1P17948 1338 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 A0A0G2JNG1 304 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 A0A1W2PPQ1 181 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 PMS2P5A8MQ11 134 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 NTN3O00634 580 aaPredicted RBP2.97□□□□□ -1.93
CHD1-207ENST00000511628 IPO8O15397 1037 aaKnown RBP2.97□□□□□ -1.93
CHD1-207ENST00000511628 SLC7A4O43246 635 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 PCDH7O60245 1069 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 TBCAO75347 108 aaKnown RBP2.97□□□□□ -1.93
CHD1-207ENST00000511628 ACSL3O95573 720 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 AMBPP02760 352 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 TFAP2AP05549 437 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 ATP5BP06576 529 aaKnown RBP2.97□□□□□ -1.93
CHD1-207ENST00000511628 RAB40ALP0C0E4 278 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 CFC1BP0CG36 223 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 CFC1P0CG37 223 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 SCG2P13521 617 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 TCF4P15884 667 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 HOXC8P31273 242 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 PCGF2P35227 344 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 PSMC4P43686 418 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 MLLT10P55197 1068 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 POLR2LP62875 67 aaKnown RBP2.97□□□□□ -1.93
CHD1-207ENST00000511628 RBP5P82980 135 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 RPL24P83731 157 aaKnown RBP2.97□□□□□ -1.93
CHD1-207ENST00000511628 GAGE5Q13069 117 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 GAGE6Q13070 117 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 PTPRCAPQ14761 206 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 KIR2DS5Q14953 304 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 NR1D2Q14995 579 aa2.97□□□□□ -1.93
CHD1-207ENST00000511628 CCNYL2Q5T2Q4 361 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms