RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 SYNDIG1Q9H7V2 258 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 MLXIPLQ9NP71 852 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 CHST11Q9NPF2 352 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 PSD3Q9NYI0 1048 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 CORO2BQ9UQ03 480 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 CA5BQ9Y2D0 317 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.39□□□□□ -1.55
GYPB-212ENST00000511198 SNX13Q9Y5W8 968 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 LOC101059948A0A1B0GTJ6 334 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 LRRIQ4A6NIV6 560 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 USP27XA6NNY8 438 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 C19orf84I3L1E1 186 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 FOXN3O00409 490 aaPredicted RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 ACKR2O00590 384 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 RRHO14718 337 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 NPC1O15118 1278 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 KCNN4O15554 427 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 LY6G6DO95868 133 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 OAS1P00973 400 aaKnown RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 CCL4P13236 92 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 CPA1P15085 419 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 TACR3P29371 465 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 ATICP31939 592 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 YWHABP31946 246 aaKnown RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 CCKBRP32239 447 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 TRAPPC10P48553 1259 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 NAPAP54920 295 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 LINC00205P59089 165 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 RPS13P62277 151 aaKnown RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 TUBB4BP68371 445 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 HSF1Q00613 529 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 SPAG1Q07617 926 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 KPNB1Q14974 876 aaKnown RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 ZRSR1Q15695 479 aaKnown RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 PFKFB3Q16875 520 aaPredicted RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 SLC45A4Q5BKX6 768 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 ZNF542PQ5EBM4 170 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 VWA2Q5GFL6 755 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 LINGO4Q6UY18 593 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 WDR75Q8IWA0 830 aaKnown RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 IQCDQ96DY2 449 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 XPO6Q96QU8 1125 aaKnown RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 WDR24Q96S15 920 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 CINPQ9BW66 212 aaPredicted RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 TM2D2Q9BX73 214 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 BBS2Q9BXC9 721 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 ADGRE3Q9BY15 652 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 UBXN6Q9BZV1 441 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 POLR3FQ9H1D9 316 aaPredicted RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 NEUROG2Q9H2A3 272 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 PNPLA8Q9NP80 782 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 HEYLQ9NQ87 328 aaPredicted RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 ZNF446Q9NWS9 450 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 KLHL42Q9P2K6 505 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 ORC3Q9UBD5 711 aaPredicted RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 HEY2Q9UBP5 337 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 PTPRJQ12913 1337 aa5.38□□□□□ -1.55
GYPB-212ENST00000511198 PRKDCP78527 4128 aaKnown RBP5.38□□□□□ -1.55
GYPB-212ENST00000511198 A0A0G2JK05 382 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 A0A1W2PQM1 296 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 ZSCAN5CA6NGD5 496 aaPredicted RBP5.37□□□□□ -1.55
GYPB-212ENST00000511198 CLCA1A8K7I4 914 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 RHPN2P1A8MT19 583 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 D6RAR5 112 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 TMX2-CTNND1H3BSU7 103 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 IKBKBO14920 756 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 AREL1O15033 823 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 ZSCAN12O43309 604 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 THAP12O43422 761 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 LATO43561 262 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 PFKFB2O60825 505 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 YEATS4O95619 227 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 DNTTP04053 509 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 RXRAP19793 462 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 PBX1P40424 430 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 CCL7P80098 99 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 ZBTB16Q05516 673 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 ZFP36L1Q07352 338 aaKnown RBP5.37□□□□□ -1.55
GYPB-212ENST00000511198 SMARCB1Q12824 385 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 OVGP1Q12889 678 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 FHL1Q13642 323 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 ZBTB6Q15916 424 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 KLHDC7AQ5VTJ3 777 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 TMEM215Q68D42 235 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 ABLIM2Q6H8Q1 611 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 TPGS1Q6ZTW0 290 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 TFAP2DQ7Z6R9 452 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 TMEM135Q86UB9 458 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 P3H2Q8IVL5 708 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 C4orf19Q8IY42 314 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 RNF152Q8N8N0 203 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 IQUBQ8NA54 791 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 ATP11CQ8NB49 1132 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 MNS1Q8NEH6 495 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 OR2T34Q8NGX1 318 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 CTCFLQ8NI51 663 aaPredicted RBP5.37□□□□□ -1.55
GYPB-212ENST00000511198 C18orf12Q96KH6 178 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 B3GNT4Q9C0J1 378 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 NUAK2Q9H093 628 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 CDT1Q9H211 546 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms