RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 MSL3P1P0C860 447 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 UGT2B7P16662 529 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 FOXN2P32314 431 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 PPARGP37231 505 aaPredicted RBP14.88□□□□□ -0.03
TPM3-219ENST00000509409 ZNF789Q5FWF6 425 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 PACS1Q6VY07 963 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 C19orf47Q8N9M1 422 aaKnown RBP14.88□□□□□ -0.03
TPM3-219ENST00000509409 TCTN2Q96GX1 697 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 HES6Q96HZ4 224 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 DPH2Q9BQC3 489 aaPredicted RBP14.88□□□□□ -0.03
TPM3-219ENST00000509409 SPRTNQ9H040 489 aaPredicted RBP14.88□□□□□ -0.03
TPM3-219ENST00000509409 SLC2A6Q9UGQ3 507 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 PLAGL1Q9UM63 463 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 VPS4AQ9UN37 437 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 ZNF451Q9Y4E5 1061 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 PCDHGA9Q9Y5G4 932 aaKnown RBP14.88□□□□□ -0.03
TPM3-219ENST00000509409 SLC5A10A0PJK1 596 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 OR1I1O60431 355 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 OR2B3O76000 313 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 CAPN1P07384 714 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 CHRM5P08912 532 aaPredicted RBP14.87□□□□□ -0.03
TPM3-219ENST00000509409 ADRA1DP25100 572 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 PSMA3P25788 255 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 ACADLP28330 430 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 SNX1Q13596 522 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 DEFB110Q30KQ9 67 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 NADK2Q4G0N4 442 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 FASTKD1Q53R41 847 aaKnown RBP14.87□□□□□ -0.03
TPM3-219ENST00000509409 TSTD2Q5T7W7 516 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 C1orf189Q5VU69 101 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 AFTPHQ6ULP2 937 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 TMEM139Q8IV31 216 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 FAM26EQ8N5C1 309 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 RNF10Q8N5U6 811 aaKnown RBP14.87□□□□□ -0.03
TPM3-219ENST00000509409 ZBTB2Q8N680 514 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 OR4L1Q8NH43 312 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 OR5K2Q8NHB8 316 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 CPT1CQ8TCG5 803 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 ADAMTS17Q8TE56 1095 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 C1orf54Q8WWF1 131 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 OR2A14Q96R47 310 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 FRMD8P1Q9BZ68 369 aaPredicted RBP14.87□□□□□ -0.03
TPM3-219ENST00000509409 FAM60AQ9NP50 221 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 SPHK1Q9NYA1 384 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 OR6C2Q9NZP2 312 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 ANAPC5Q9UJX4 755 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 PADI2Q9Y2J8 665 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 AP1M2Q9Y6Q5 423 aa14.87□□□□□ -0.03
TPM3-219ENST00000509409 COL12A1Q99715 3063 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 A0A0J9YY10 115 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 BHMG1C9JSJ3 638 aaPredicted RBP14.86□□□□□ -0.03
TPM3-219ENST00000509409 LIASO43766 372 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 CBSLP0DN79 551 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 OTX2P32243 289 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 CBSP35520 551 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 GRIA1P42261 906 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 CD97P48960 835 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 RRADP55042 308 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 PRAMEP78395 509 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 HSPA14Q0VDF9 509 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 NCF4Q15080 339 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 FAM198BQ6UWH4 519 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 MED25Q71SY5 747 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 RAB43Q86YS6 212 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 CCDC89Q8N998 374 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 TMEM102Q8N9M5 508 aaPredicted RBP14.86□□□□□ -0.03
TPM3-219ENST00000509409 OR13J1Q8NGT2 312 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 CFAP61Q8NHU2 1237 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 SGSM3Q96HU1 749 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 C17orf62Q9BQA9 187 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 DHRS4Q9BTZ2 278 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 TSSK1BQ9BXA7 367 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 MFRPQ9BY79 579 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 RAB6BQ9NRW1 208 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 GUCA1BQ9UMX6 200 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 PCDHGB7Q9Y5F8 929 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 CAPN6Q9Y6Q1 641 aa14.86□□□□□ -0.03
TPM3-219ENST00000509409 NBASA2RRP1 2371 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 DPM1O60762 260 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 SUN1O94901 812 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 ETS1P14921 441 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 DCDP81605 110 aaKnown RBP14.85□□□□□ -0.03
TPM3-219ENST00000509409 SRSF1Q07955 248 aaKnown RBP eCLIP14.85□□□□□ -0.032e-7■□□□□ 8.7
TPM3-219ENST00000509409 ATP1A4Q13733 1029 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 OASLQ15646 514 aaKnown RBP14.85□□□□□ -0.03
TPM3-219ENST00000509409 ZIC1Q15915 447 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 NLRP9Q7RTR0 991 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 PRUNE1Q86TP1 453 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 SLC13A5Q86YT5 568 aaPredicted RBP14.85□□□□□ -0.03
TPM3-219ENST00000509409 C2orf73Q8N5S3 287 aaPredicted RBP14.85□□□□□ -0.03
TPM3-219ENST00000509409 ZNF655Q8N720 491 aaPredicted RBP14.85□□□□□ -0.03
TPM3-219ENST00000509409 PPHLN1Q8NEY8 458 aaKnown RBP14.85□□□□□ -0.03
TPM3-219ENST00000509409 FDCSPQ8NFU4 85 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 ZNF778Q96MU6 729 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 RANBP9Q96S59 729 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 MLXIPLQ9NP71 852 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 TXLNGQ9NUQ3 528 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 MAP10Q9P2G4 905 aa14.85□□□□□ -0.03
TPM3-219ENST00000509409 IFT80Q9P2H3 777 aaPredicted RBP14.85□□□□□ -0.03
TPM3-219ENST00000509409 NDOR1Q9UHB4 597 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 315.5 ms