RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 FAM159BA6NKW6 160 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 F8W8V4 182 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 SMAPO00193 183 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 AP3B1O00203 1094 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 TOX3O15405 576 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 EFSO43281 561 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 KIF1CO43896 1103 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 RAD1O60671 282 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 OGNP20774 298 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 RPS3P23396 243 aaKnown RBP eCLIP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 NDUFS1P28331 727 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 GCAP28676 217 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 FMO4P31512 558 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 CDKN2DP55273 166 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 VSNL1P62760 191 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 PRKAA1Q13131 559 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 CALCOCO2Q13137 446 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 SRSF6Q13247 344 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 FRG1Q14331 258 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 BRD3Q15059 726 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 KYNUQ16719 465 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 SYTL3Q4VX76 610 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 GLE1Q53GS7 698 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 FASTKD1Q53R41 847 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 DNTTIP2Q5QJE6 756 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 ARMC3Q5W041 872 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 CAPRIN2Q6IMN6 1127 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 CYB5D1Q6P9G0 228 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 TMEM207Q6UWW9 146 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 OOSP2Q86WS3 158 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 RASGRP3Q8IV61 690 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 GSDMBQ8TAX9 411 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 HM13Q8TCT9 377 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 LRRC39Q96DD0 335 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 RNF31Q96EP0 1072 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 OR6C1Q96RD1 312 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 NDNQ99608 321 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 OLFM1Q99784 485 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 PHACTR1Q9C0D0 580 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 CDC42EP4Q9H3Q1 356 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 COG4Q9H9E3 785 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 FBXO8Q9NRD0 319 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 HRASLS2Q9NWW9 162 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 OGFRQ9NZT2 677 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 FBXO5Q9UKT4 447 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 RUVBL2Q9Y230 463 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 AHCTF1Q8WYP5 2266 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 MN1Q10571 1320 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 C17orf113A0A1B0GUU1 675 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 MAGEB16A2A368 324 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 GSAPA4D1B5 854 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 OR6C74A6NCV1 312 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 QSOX1O00391 747 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 EIF3HO15372 352 aaKnown RBP eCLIP8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 GPC4O75487 556 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 STK17BO94768 372 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 AP2A2O94973 939 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 WISP3O95389 354 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 C9P02748 559 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 FTH1P02794 183 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 PRB1P04280 392 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 ANKRD34CP0C6C1 535 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 OR56A5P0C7T3 313 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 MAP4P27816 1152 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 AOAHP28039 575 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 ACADLP28330 430 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 PPARGP37231 505 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 NSG1P42857 185 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 CSRP3P50461 194 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 CLCN7P51798 805 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 CSE1LP55060 971 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 EIF3BP55884 814 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 PPP1CAP62136 330 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 SH3BP2P78314 561 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 C19orf57Q0VDD7 668 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 GRB7Q14451 532 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 ZNF460Q14592 562 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 UAP1Q16222 522 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 ERCC6LQ2NKX8 1250 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 LYPLAL1Q5VWZ2 237 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 DTX1Q86Y01 620 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 RELL1Q8IUW5 271 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 NLGN4XQ8N0W4 816 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 OTUD6BQ8N6M0 293 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 BMPERQ8N8U9 685 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 SIDT2Q8NBJ9 832 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 BBOF1Q8ND07 529 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 LSM14AQ8ND56 463 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 NLGN4YQ8NFZ3 816 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 OR4E2Q8NGC2 313 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 ZFPM2Q8WW38 1151 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 LCN9Q8WX39 176 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 ELMO1Q92556 727 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 UBXN4Q92575 508 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 NKD1Q969G9 470 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 AARSD1Q9BTE6 412 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 MENTQ9BUN1 341 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 FUT8Q9BYC5 575 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 ULBP3Q9BZM4 244 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 SRMSQ9H3Y6 488 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms