RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ZIC1Q15915 447 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 PTCHD3Q3KNS1 767 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 SYTL3Q4VX76 610 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 TSTD2Q5T7W7 516 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 SEL1L2Q5TEA6 688 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 ZNF385CQ66K41 422 aaPredicted RBP12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 AFTPHQ6ULP2 937 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 UNC5AQ6ZN44 842 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 ZNF534Q76KX8 674 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 PRUNE1Q86TP1 453 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 SLC13A5Q86YT5 568 aaPredicted RBP12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 RNF10Q8N5U6 811 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 C19orf47Q8N9M1 422 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 TEX19Q8NA77 164 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 GLIS1Q8NBF1 620 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 SPC24Q8NBT2 197 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 OR5K2Q8NHB8 316 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 HDAC10Q969S8 669 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 MIB2Q96AX9 1013 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 ZNF778Q96MU6 729 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 RANBP9Q96S59 729 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 FRMD8P1Q9BZ68 369 aaPredicted RBP12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 ING2Q9H160 280 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 FAM60AQ9NP50 221 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 MLXIPLQ9NP71 852 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 TCAF1Q9Y4C2 921 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 PCDHGA9Q9Y5G4 932 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 UTP20O75691 2785 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 CLEC18AA5D8T8 446 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 E7EQ34 232 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 ZNF749O43361 778 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 GOT2P00505 430 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 CHRM5P08912 532 aaPredicted RBP12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 OR56A5P0C7T3 313 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 ETS1P14921 441 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 GABRA4P48169 554 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 CD97P48960 835 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 PGDP52209 483 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 MLLT10P55197 1068 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 PLOD1Q02809 727 aaPredicted RBP12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 SEMA3AQ14563 771 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 NCF4Q15080 339 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 DEFB110Q30KQ9 67 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 LYPLAL1Q5VWZ2 237 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 PAPD7Q5XG87 772 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 CLEC18BQ6UXF7 455 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 PPP1R21Q6ZMI0 780 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 TBC1D21Q8IYX1 336 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 CLEC18CQ8NCF0 446 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 OR4L1Q8NH43 312 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 LKAAEAR1Q8TD35 194 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 C1orf54Q8WWF1 131 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 OR2A14Q96R47 310 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 CASS4Q9NQ75 786 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 SPHK1Q9NYA1 384 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 OR6C2Q9NZP2 312 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 POLG2Q9UHN1 485 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 SERTAD3Q9UJW9 196 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 PLAGL1Q9UM63 463 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 CCDC88CQ9P219 2028 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 NBPF19A0A087WUL8 3843 aa12.57□□□□□ -0.4
HMGCS1-205ENST00000508319 SHANK1Q9Y566 2161 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 A0A0J9YY10 115 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 MAP3K7O43318 606 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 CEACAM4O75871 244 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 ADRA1DP25100 572 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 PEBP1P30086 187 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 SRSF1Q07955 248 aaKnown RBP eCLIP12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 SIX1Q15475 284 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 VRK3Q8IV63 474 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 SLC22A15Q8IZD6 547 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 PEX13Q92968 403 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 SGSM3Q96HU1 749 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 DPH2Q9BQC3 489 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 SLC25A23Q9BV35 468 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 CHRNA10Q9GZZ6 450 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 ACSS2Q9NR19 701 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 RAB6BQ9NRW1 208 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 GUCA1BQ9UMX6 200 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 ZNF148Q9UQR1 794 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 CDYLQ9Y232 598 aa12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 TDRKHQ9Y2W6 561 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-205ENST00000508319 PCM1Q15154 2024 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 E7EVH7 732 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 KRT86O43790 486 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 OR2B3O76000 313 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 TMEM63AO94886 807 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 GAS8O95995 478 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 APRTP07741 180 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 CTSBP07858 339 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 PKLRP30613 574 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 CCR7P32248 378 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 CCL11P51671 97 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 CSE1LP55060 971 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 SNX1Q13596 522 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 UBAP2LQ14157 1087 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 RHBDD2Q6NTF9 364 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 NLRP9Q7RTR0 991 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 HOOK3Q86VS8 718 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms