RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 H0YJX3 145 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 MTX2O75431 263 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 ELFN1P0C7U0 828 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 GNPDA1P46926 289 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 TMC5Q6UXY8 1006 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 DLEU7Q6UYE1 221 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 RASGEF1AQ8N9B8 481 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 GLB1L3Q8NCI6 653 aaPredicted RBP17.24■□□□□ 0.35
SFXN1-208ENST00000507823 MCOLN3Q8TDD5 553 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 ELMO1Q92556 727 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 FARSBQ9NSD9 589 aaKnown RBP17.24■□□□□ 0.35
SFXN1-208ENST00000507823 ZNF490Q9ULM2 529 aaPredicted RBP17.24■□□□□ 0.35
SFXN1-208ENST00000507823 EIF3LQ9Y262 564 aaKnown RBP17.24■□□□□ 0.35
SFXN1-208ENST00000507823 POLR3HQ9Y535 204 aaPredicted RBP17.24■□□□□ 0.35
SFXN1-208ENST00000507823 SLC5A10A0PJK1 596 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 OTOL1A6NHN0 477 aaPredicted RBP17.24■□□□□ 0.35
SFXN1-208ENST00000507823 WNT9AO14904 365 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 AREL1O15033 823 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 KRT6AP02538 564 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 KRT6BP04259 564 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 VARSP26640 1264 aaKnown RBP17.24■□□□□ 0.35
SFXN1-208ENST00000507823 SLC6A11P48066 632 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 KRT6CP48668 564 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 ATXN3P54252 364 aaPredicted RBP17.24■□□□□ 0.35
SFXN1-208ENST00000507823 GRAMD1BQ3KR37 738 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 TIGD2Q4W5G0 525 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 RGL4Q8IZJ4 473 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 HBEGFQ99075 208 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 LMAN2LQ9H0V9 348 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 TMEM245Q9H330 911 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 CCM2LQ9NUG4 571 aaPredicted RBP17.24■□□□□ 0.35
SFXN1-208ENST00000507823 GDE1Q9NZC3 331 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 DEC1Q9P2X7 70 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 CNOT6Q9ULM6 557 aaKnown RBP17.24■□□□□ 0.35
SFXN1-208ENST00000507823 DENRO43583 198 aaKnown RBP17.23■□□□□ 0.35
SFXN1-208ENST00000507823 RSL1D1O76021 490 aaKnown RBP17.23■□□□□ 0.35
SFXN1-208ENST00000507823 ACPPP15309 386 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 FCARP24071 287 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 MAPK9P45984 424 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 ZNF33BQ06732 778 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 GRIN2CQ14957 1233 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 PDGFRLQ15198 375 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 PTCHD3Q3KNS1 767 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 NEK5Q6P3R8 708 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 HID1Q8IV36 788 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 APLFQ8IW19 511 aaPredicted RBP17.23■□□□□ 0.35
SFXN1-208ENST00000507823 ICA1LQ8NDH6 482 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 FGF13Q92913 245 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 AP2M1Q96CW1 435 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 LRTM1Q9HBL6 345 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 FFAR3O14843 346 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 GPR42O15529 346 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 STAMBPO95630 424 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 SOD1P00441 154 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 SLC2A4P14672 509 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 GSK3BP49841 420 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 ZNF366Q8N895 744 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 ARRDC3Q96B67 414 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 ACTR8Q9H981 624 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 HPS4Q9NQG7 708 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 C1orf109Q9NX04 203 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 NEUROG3Q9Y4Z2 214 aa17.23■□□□□ 0.35
SFXN1-208ENST00000507823 HEPACAM2A8MVW5 462 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 UGDHO60701 494 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 FSHRP23945 695 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 HTR1EP28566 365 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 CTSCP53634 463 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 RPL38P63173 70 aaKnown RBP17.22■□□□□ 0.35
SFXN1-208ENST00000507823 ELP6Q0PNE2 266 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 ELAVL3Q14576 367 aaKnown RBP17.22■□□□□ 0.35
SFXN1-208ENST00000507823 BCL7AQ4VC05 210 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 NANOGP8Q6NSW7 305 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 OR8D1Q8WZ84 308 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 FAM129BQ96TA1 746 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 CCM2Q9BSQ5 444 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 EFHD1Q9BUP0 239 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 NANOGQ9H9S0 305 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 DNAJC11Q9NVH1 559 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 RAB26Q9ULW5 256 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 ZFC3H1O60293 1989 aaKnown RBP17.22■□□□□ 0.35
SFXN1-208ENST00000507823 ATG13O75143 517 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 PFN3P60673 137 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 CYP2R1Q6VVX0 501 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 ACPTQ9BZG2 426 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 ALG2Q9H553 416 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 INTS7Q9NVH2 962 aaKnown RBP17.22■□□□□ 0.35
SFXN1-208ENST00000507823 DZANK1Q9NVP4 752 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 SLAMF8Q9P0V8 285 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 SNX6Q9UNH7 406 aa17.22■□□□□ 0.35
SFXN1-208ENST00000507823 KPNA3O00505 521 aaPredicted RBP17.21■□□□□ 0.35
SFXN1-208ENST00000507823 ARPC2O15144 300 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 TSPAN6O43657 245 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 PRAMEF4O60810 478 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 RNASEH1O60930 286 aaKnown RBP17.21■□□□□ 0.35
SFXN1-208ENST00000507823 LYNP07948 512 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 ZNF26P17031 533 aaPredicted RBP17.21■□□□□ 0.35
SFXN1-208ENST00000507823 HMGCS1Q01581 520 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 DPTQ07507 201 aa17.21■□□□□ 0.35
SFXN1-208ENST00000507823 TMEM115Q12893 351 aaPredicted RBP17.21■□□□□ 0.35
SFXN1-208ENST00000507823 MED21Q13503 144 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms