RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 KBTBD3Q8NAB2 608 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 OR13J1Q8NGT2 312 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 ZNF473Q8WTR7 871 aaKnown RBP3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 MOB3AQ96BX8 217 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 DHX58Q96C10 678 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 ST6GAL2Q96JF0 529 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 RMDN2Q96LZ7 410 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 MUS81Q96NY9 551 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 MYADMQ96S97 322 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 CPNE1Q99829 537 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 FERMT1Q9BQL6 677 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 MGME1Q9BQP7 344 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 ADPGKQ9BRR6 497 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 ARRDC1-AS1Q9H2J1 176 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 PELI2Q9HAT8 420 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 Q9N2K0 584 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 MRGBPQ9NV56 204 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 FAM118AQ9NWS6 357 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 LRWD1Q9UFC0 647 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 SLC7A7Q9UM01 511 aa3.8□□□□□ -1.8
HMGB1P28-201ENST00000507778 CACNA1IQ9P0X4 2223 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 KAT6BQ8WYB5 2073 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 ARHGEF37A1IGU5 675 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 OR6C76A6NM76 312 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 ANXA2P2A6NMY6 339 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 CCDC188H7C350 402 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 RNASEH1O60930 286 aaKnown RBP3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 INHBAP08476 426 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 SMIM18P0DKX4 95 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 SAGP10523 405 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 CYP11B2P19099 503 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 SP100P23497 879 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 AZGP1P25311 298 aaKnown RBP3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 PSMA3P25788 255 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 PTPN3P26045 913 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 EPHA2P29317 976 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 CDC25CP30307 473 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 LHX1P48742 406 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 NR2C2P49116 596 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 CAPZA1P52907 286 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 GAS1P54826 345 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 RBP5P82980 135 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 MZT1Q08AG7 82 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 DMPKQ09013 629 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 BFSP1Q12934 665 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 DMP1Q13316 513 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 SCARB2Q14108 478 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 C6orf136Q5SQH8 315 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 CCNYL2Q5T2Q4 361 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 C11orf63Q6NUN7 778 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 SHQ1Q6PI26 577 aaKnown RBP3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 TRAT1Q6PIZ9 186 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 CORO6Q6QEF8 472 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 GDPD4Q6W3E5 623 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 NUP54Q7Z3B4 507 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 ARHGAP22Q7Z5H3 698 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 ZNF554Q86TJ5 538 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 TLK2Q86UE8 772 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 SLC24A4Q8NFF2 622 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 OR2T12Q8NG77 320 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 FGFBP3Q8TAT2 258 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 DEPDC1BQ8WUY9 529 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 IRGQQ8WZA9 623 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 STAMBPL1Q96FJ0 436 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 OTUB1Q96FW1 271 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 RTP3Q9BQQ7 232 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 TRMT61BQ9BVS5 477 aaKnown RBP3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 FZD8Q9H461 694 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 TFB2MQ9H5Q4 396 aaKnown RBP3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 GRPEL1Q9HAV7 217 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 DONSONQ9NYP3 566 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 TAAR2Q9P1P5 351 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 GTF3C4Q9UKN8 822 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 MTUS1Q9ULD2 1270 aa3.79□□□□□ -1.8
HMGB1P28-201ENST00000507778 PCDH11YQ9BZA8 1340 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 AP5Z1O43299 807 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 PRKNO60260 465 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 KRT36O76013 467 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 CRYAAP02489 173 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 FGF5P12034 268 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 PDGFRAP16234 1089 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 CD22P20273 847 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 NR1D1P20393 614 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 HOXC13P31276 330 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 BMXP51813 675 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 PDX1P52945 283 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 CDH11P55287 796 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 RPL36AP83881 106 aaKnown RBP3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 MAT1AQ00266 395 aaKnown RBP3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 ZNF672Q499Z4 452 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 ELFN2Q5R3F8 820 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 CAVIN1Q6NZI2 390 aaKnown RBP3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 C11orf57Q6ZUT1 292 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 ANO5Q75V66 913 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 DNAJB7Q7Z6W7 309 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 NUDT13Q86X67 352 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 PLD3Q8IV08 490 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 OR8H3Q8N146 312 aa3.78□□□□□ -1.8
HMGB1P28-201ENST00000507778 NPEPL1Q8NDH3 523 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms