RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 PIPSLA2A3N6 862 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 IQCF5A8MTL0 148 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 H3BMH7 237 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 J3QKU1 62 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 PRMT5O14744 637 aaPredicted RBP8.78□□□□□ -1
PDLIM5-209ENST00000506632 CD3EAPO15446 510 aaKnown RBP8.78□□□□□ -1
PDLIM5-209ENST00000506632 SUV39H1O43463 412 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 NRDCO43847 1150 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 SCRG1O75711 98 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 SLCO2B1O94956 709 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 NTRK1P04629 796 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 CHRM5P08912 532 aaPredicted RBP8.78□□□□□ -1
PDLIM5-209ENST00000506632 CCNYL3P0C7X3 344 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 PVRP15151 417 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 RPS3P23396 243 aaKnown RBP eCLIP8.78□□□□□ -1
PDLIM5-209ENST00000506632 MGAT1P26572 445 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 AOAHP28039 575 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 PKLRP30613 574 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 RORAP35398 523 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 CCR10P46092 362 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 GABRA4P48169 554 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 TTPAP49638 278 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 GPS2Q13227 327 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 KCNAB2Q13303 367 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 GRB7Q14451 532 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 CYP1B1Q16678 543 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 KCTD19Q17RG1 926 aaPredicted RBP8.78□□□□□ -1
PDLIM5-209ENST00000506632 SYTL3Q4VX76 610 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 DNAJC21Q5F1R6 531 aaKnown RBP8.78□□□□□ -1
PDLIM5-209ENST00000506632 PRAMEF17Q5VTA0 474 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 SPESP1Q6UW49 350 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 UNC5AQ6ZN44 842 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 CDHR3Q6ZTQ4 885 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 GSTA5Q7RTV2 222 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 LDB1Q86U70 411 aaPredicted RBP8.78□□□□□ -1
PDLIM5-209ENST00000506632 REXO1L1PQ8IX06 675 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 OR1L3Q8NH93 324 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 APOBEC4Q8WW27 367 aaKnown RBP8.78□□□□□ -1
PDLIM5-209ENST00000506632 MFSD3Q96ES6 412 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 PBKQ96KB5 322 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 OR2A14Q96R47 310 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 RUFY1Q96T51 708 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 CHRNA10Q9GZZ6 450 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 SYBUQ9NX95 663 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 SPHK1Q9NYA1 384 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 OR6C2Q9NZP2 312 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 SOX13Q9UN79 622 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 KCNMB2Q9Y691 235 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 TENM4Q6N022 2769 aa8.78□□□□□ -1
PDLIM5-209ENST00000506632 TMEM150CB9EJG8 249 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 CREG1O75629 220 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 TMEM63AO94886 807 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 CAPN1P07384 714 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 UGT2B7P16662 529 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 PTPN4P29074 926 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 PEBP1P30086 187 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 NFKB2Q00653 900 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 HSPA14Q0VDF9 509 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 TRIP13Q15645 432 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 ZIC1Q15915 447 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 KYNUQ16719 465 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 SLC5A12Q1EHB4 618 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 TYSND1Q2T9J0 566 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 DEFB109BQ30KR1 87 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 PLEKHS1Q5SXH7 462 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 ANKRD22Q5VYY1 191 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 IZUMO3Q5VZ72 239 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 ZNF385CQ66K41 422 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 KIAA0930Q6ICG6 404 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 C16orf46Q6P387 395 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 FAM199XQ6PEV8 388 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 CES3Q6UWW8 571 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 UNC5DQ6UXZ4 953 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 TRIM73Q86UV7 250 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 CAND1Q86VP6 1230 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 LRRC6Q86X45 466 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 TMEM126BQ8IUX1 230 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 DSELQ8IZU8 1212 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 KRT222Q8N1A0 295 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 C19orf47Q8N9M1 422 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 ASZ1Q8WWH4 475 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 CPT1BQ92523 772 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 MS4A14Q96JA4 679 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 BIRC8Q96P09 236 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 TSSK1BQ9BXA7 367 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 GPR87Q9BY21 358 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 ACTL8Q9H568 366 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 FANCEQ9HB96 536 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 FAM60AQ9NP50 221 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 PCMTD2Q9NV79 361 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 ANAPC5Q9UJX4 755 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 POLHQ9Y253 713 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 MYO18BQ8IUG5 2567 aa8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 FLNBO75369 2602 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-209ENST00000506632 FER1L5A0AVI2 2057 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 A0A0J9YY10 115 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 MEN1O00255 615 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 HCRTR1O43613 425 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 SLC28A2O43868 658 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 AVILO75366 819 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms