RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 CIDEBQ9UHD4 219 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 ERRFI1Q9UJM3 462 aaPredicted RBP12.73□□□□□ -0.37
DDX41-204ENST00000504807 PADI1Q9ULC6 663 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 CDYLQ9Y232 598 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 ESPL1Q14674 2120 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 ARHGAP10A1A4S6 786 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 GSAPA4D1B5 854 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 KRT87PA6NCN2 255 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 GOLGA6L9A6NEM1 432 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 MKRN2OSH3BPM6 223 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 LDLRP01130 860 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 IFNB1P01574 187 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 RALBP11234 206 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 RPL22P35268 128 aaKnown RBP12.72□□□□□ -0.37
DDX41-204ENST00000504807 RORAP35398 523 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 ACY1Q03154 408 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 CHAF1BQ13112 559 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 SEMA5AQ13591 1074 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 TSTD2Q5T7W7 516 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 TCTN3Q6NUS6 607 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 KLHL35Q6PF15 583 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 PACS1Q6VY07 963 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 CDHR3Q6ZTQ4 885 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 TFGQ92734 400 aaPredicted RBP12.72□□□□□ -0.37
DDX41-204ENST00000504807 MARVELD3Q96A59 401 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 POM121Q96HA1 1249 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 PPP1R2P1Q96PQ5 205 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 MENTQ9BUN1 341 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 CHST8Q9H2A9 424 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 TFB2MQ9H5Q4 396 aaKnown RBP12.72□□□□□ -0.37
DDX41-204ENST00000504807 SOHLH2Q9NX45 425 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 HIVEP3Q5T1R4 2406 aa12.72□□□□□ -0.37
DDX41-204ENST00000504807 TCRBV7S3A2A0A539 114 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 PIPSLA2A3N6 862 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 KLHL33A6NCF5 533 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 CFAP99D6REC4 459 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 PTMAP06454 111 aaKnown RBP12.71□□□□□ -0.37
DDX41-204ENST00000504807 F7P08709 466 aaPredicted RBP12.71□□□□□ -0.37
DDX41-204ENST00000504807 CDH3P22223 829 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 NDUFS1P28331 727 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 CCR7P32248 378 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 CD151P48509 253 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 CSE1LP55060 971 aaKnown RBP12.71□□□□□ -0.37
DDX41-204ENST00000504807 CDH17Q12864 832 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 GRB7Q14451 532 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 DEFB110Q30KQ9 67 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 PTCHD3Q3KNS1 767 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 ZNF385CQ66K41 422 aaPredicted RBP12.71□□□□□ -0.37
DDX41-204ENST00000504807 FAM198BQ6UWH4 519 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 UNC5AQ6ZN44 842 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 AMIGO1Q86WK6 493 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 TMEM126BQ8IUX1 230 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 KRT222Q8N1A0 295 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 RNF10Q8N5U6 811 aaKnown RBP12.71□□□□□ -0.37
DDX41-204ENST00000504807 ADAMTS17Q8TE56 1095 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 ELMO1Q92556 727 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 OR2A14Q96R47 310 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 TRIM56Q9BRZ2 755 aaKnown RBP12.71□□□□□ -0.37
DDX41-204ENST00000504807 EFHD1Q9BUP0 239 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 CHRAC1Q9NRG0 131 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 RAB6BQ9NRW1 208 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 KCND1Q9NSA2 647 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 PCMTD2Q9NV79 361 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 ACTR10Q9NZ32 417 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 TLK1Q9UKI8 766 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 TCAF1Q9Y4C2 921 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 COLEC10Q9Y6Z7 277 aa12.71□□□□□ -0.37
DDX41-204ENST00000504807 NAV3Q8IVL0 2385 aa12.71□□□□□ -0.38
DDX41-204ENST00000504807 CCDC168Q8NDH2 2452 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 TCP11X1B4DZS4 312 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 C21orf140B9A014 251 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 TMEM150CB9EJG8 249 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 DIAPH2O60879 1101 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 AP2A2O94973 939 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 UGT2B7P16662 529 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 ARNTP27540 789 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 PTPN4P29074 926 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 NSG1P42857 185 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 KCNJ1P48048 391 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 ARL4DP49703 201 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 RPA4Q13156 261 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 KRT33BQ14525 404 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 ITIH4Q14624 930 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 ARMC6Q6NXE6 501 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 DSELQ8IZU8 1212 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 DNAAF3Q8N9W5 541 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 LINC01555Q8NAE3 123 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 HEXDCQ8WVB3 486 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 FCRL4Q96PJ5 515 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 RANBP9Q96S59 729 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 UNKQ9C0B0 810 aaKnown RBP12.7□□□□□ -0.38
DDX41-204ENST00000504807 MVB12BQ9H7P6 319 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 LZTFL1Q9NQ48 299 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 C1GALT1Q9NS00 363 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 ZNF148Q9UQR1 794 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 KLHL20Q9Y2M5 609 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 MAP4K5Q9Y4K4 846 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 HEBP2Q9Y5Z4 205 aa12.7□□□□□ -0.38
DDX41-204ENST00000504807 TNRC6AQ8NDV7 1962 aaKnown RBP12.7□□□□□ -0.38
DDX41-204ENST00000504807 FER1L5A0AVI2 2057 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms