RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SYTL3Q4VX76 610 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 RFTN2Q52LD8 501 aaPredicted RBP20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 MINDY1Q8N5J2 469 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 LILRA3Q8N6C8 439 aaPredicted RBP20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 FAM156AQ8NDB6 213 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 DNAJC9Q8WXX5 260 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 RAB7BQ96AH8 199 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 LRCH3Q96II8 777 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 RSRC1Q96IZ7 334 aaKnown RBP20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 GDF15Q99988 308 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 SLC39A3Q9BRY0 314 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 FARSBQ9NSD9 589 aaKnown RBP20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 CLEC1BQ9P126 229 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 ABCD2Q9UBJ2 740 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 GULP1Q9UBP9 304 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 FADS3Q9Y5Q0 445 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 KCNE1BA0A087WTH5 132 aa20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 FAM234BA2RU67 622 aa20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 PABPN1LA6NDY0 278 aaKnown RBP20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 ARHGEF33A8MVX0 844 aa20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 ARNTLO00327 626 aa20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 RGS14O43566 566 aa20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 LZTS3O60299 673 aaPredicted RBP20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 EEDO75530 441 aaKnown RBP20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 GDI1P31150 447 aa20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 POLR2JP52435 117 aaKnown RBP20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 KCNK10P57789 538 aa20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 ADAM15Q13444 863 aa20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 SAMD4BQ5PRF9 694 aaKnown RBP20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 N4BP2L2Q92802 583 aaPredicted RBP20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 ACTL8Q9H568 366 aa20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 ACTR8Q9H981 624 aa20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 ZNF490Q9ULM2 529 aaPredicted RBP20.83■□□□□ 0.92
UBE2D3-216ENST00000503742 KRT87PA6NCN2 255 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 ANKRD28O15084 1053 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 GPR1P46091 355 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 PREPP48147 710 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 SLC7A2P52569 658 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 CNTN1Q12860 1018 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 ABRQ12979 859 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 MUM1Q2TAK8 710 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 ITPRIPL2Q3MIP1 535 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 PIP5KL1Q5T9C9 394 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 RAET1GQ6H3X3 334 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 PRMT9Q6P2P2 845 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 SLC22A15Q8IZD6 547 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 L3MBTL4Q8NA19 623 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 PPFIBP2Q8ND30 876 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 BHLHE22Q8NFJ8 381 aaPredicted RBP20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 NAF1Q96HR8 494 aaKnown RBP20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 RPP25Q9BUL9 199 aaKnown RBP20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 GID8Q9NWU2 228 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 FAM8A1Q9UBU6 413 aa20.82■□□□□ 0.92
UBE2D3-216ENST00000503742 APODP05090 189 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 G6PDP11413 515 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 TCN1P20061 433 aaPredicted RBP20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 PFN3P60673 137 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 FOXM1Q08050 763 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 TRAP1Q12931 704 aaKnown RBP20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 TLR1Q15399 786 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 IL23RQ5VWK5 629 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 CYP20A1Q6UW02 462 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 TRIM74Q86UV6 250 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 ZFAND4Q86XD8 727 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 PYCR2Q96C36 320 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 ZCCHC2Q9C0B9 1178 aaKnown RBP20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 DNAJC11Q9NVH1 559 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 SLC22A14Q9Y267 594 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 STON1Q9Y6Q2 735 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 KRT6AP02538 564 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 KRT6BP04259 564 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 RPSAP08865 295 aaKnown RBP20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 ATP6V1C1P21283 382 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 MAPK9P45984 424 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 KRT6CP48668 564 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 FAM46CQ5VWP2 391 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 CES5AQ6NT32 575 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 ZFP1Q6P2D0 407 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 KBTBD2Q8IY47 623 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 RGL4Q8IZJ4 473 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 VPS33AQ96AX1 596 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 LRRC58Q96CX6 371 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 TRIM39Q9HCM9 518 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 PSMD13Q9UNM6 376 aa20.81■□□□□ 0.92
UBE2D3-216ENST00000503742 CKAP5Q14008 2032 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 CCDC154A6NI56 674 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 PRAMEF4O60810 478 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 ACADSP16219 412 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 DRD3P35462 400 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 HMGCS1Q01581 520 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 PRKG2Q13237 762 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 PAGE3Q5JUK9 113 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 PRAMEF9Q5VWM5 478 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 XKR5Q6UX68 686 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 KLHDC8AQ8IYD2 350 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 CXorf40AQ8TE69 158 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 ERLEC1Q96DZ1 483 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 TRMT61BQ9BVS5 477 aaKnown RBP20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 OR2AG1Q9H205 316 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms