RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 SYTL2Q9HCH5 934 aa8.21□□□□□ -1.1
HMGXB4-207ENST00000498212 TREX1Q9NSU2 369 aa8.21□□□□□ -1.1
HMGXB4-207ENST00000498212 SERTAD3Q9UJW9 196 aa8.21□□□□□ -1.1
HMGXB4-207ENST00000498212 POLHQ9Y253 713 aa8.21□□□□□ -1.1
HMGXB4-207ENST00000498212 KCNMB2Q9Y691 235 aa8.21□□□□□ -1.1
HMGXB4-207ENST00000498212 KALRNO60229 2985 aa8.21□□□□□ -1.1
HMGXB4-207ENST00000498212 FASNP49327 2511 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 CDC14CA4D256 554 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 IQCF5A8MTL0 148 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 PRMT5O14744 637 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 CD3EAPO15446 510 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 SUV39H1O43463 412 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 RECKO95980 971 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 APOA4P06727 396 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 CHRM5P08912 532 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 TPBGLP0DKB5 382 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 PVRP15151 417 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 UGT2B7P16662 529 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 TPSB2P20231 275 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 CYP2A7P20853 494 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 MGAT1P26572 445 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 NMBRP28336 390 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 PTPN4P29074 926 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 CDK16Q00536 496 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 ABRQ12979 859 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 TMED2Q15363 201 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 TRIP13Q15645 432 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 TPSAB1Q15661 275 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 DNAJC21Q5F1R6 531 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 PRAMEF17Q5VTA0 474 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 IZUMO3Q5VZ72 239 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 PTRHD1Q6GMV3 140 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 LRRC8BQ6P9F7 803 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 ZNF517Q6ZMY9 492 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 SYVN1Q86TM6 617 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 TMEM135Q86UB9 458 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 PTRH1Q86Y79 214 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 SLC22A15Q8IZD6 547 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 DSELQ8IZU8 1212 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 KRT222Q8N1A0 295 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 MPP5Q8N3R9 675 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 PRELID2Q8N945 189 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 C19orf47Q8N9M1 422 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 SLC38A9Q8NBW4 561 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 OR1L3Q8NH93 324 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 C9orf43Q8TAL5 461 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 LKAAEAR1Q8TD35 194 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 ASZ1Q8WWH4 475 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 N4BP2L2Q92802 583 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 MR1Q95460 341 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 CLIP3Q96DZ5 547 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 ABHD17AQ96GS6 310 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 PANX3Q96QZ0 392 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 OR2A14Q96R47 310 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 RUFY1Q96T51 708 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 SLC7A5P2Q9GIP4 190 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 MRM3Q9HC36 420 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 SYBUQ9NX95 663 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 OR6C2Q9NZP2 312 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 MARCH4Q9P2E8 410 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 GNPTGQ9UJJ9 305 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 TTC7AQ9ULT0 858 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 CDYLQ9Y232 598 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 FARSAQ9Y285 508 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 JRKLQ9Y4A0 524 aa8.2□□□□□ -1.1
HMGXB4-207ENST00000498212 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 A0A0J9YY10 115 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 TCRBV7S3A2A0A539 114 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 ISM1B1AKI9 464 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 E7EQ34 232 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 MKRN2OSH3BPM6 223 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 PYCARD-AS1I3L0S3 204 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 MEN1O00255 615 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 GPC4O75487 556 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 NDUFS3O75489 264 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 ZIC2O95409 532 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 RPN2P04844 631 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 RPS3P23396 243 aaKnown RBP eCLIP8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 AOAHP28039 575 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 PKLRP30613 574 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 RORAP35398 523 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 VPS41P49754 854 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 TERF1P54274 439 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 ITGA1P56199 1179 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 RPS18P62269 152 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 SARNPP82979 210 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 GPS1Q13098 491 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 KCNJ11Q14654 390 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 KIR2DS3Q14952 304 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 UGT8Q16880 541 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 KCTD19Q17RG1 926 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 LACTB2Q53H82 288 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 ZNF789Q5FWF6 425 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 PLEKHS1Q5SXH7 462 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 CES3Q6UWW8 571 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 UNC5DQ6UXZ4 953 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 CDHR3Q6ZTQ4 885 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 TRIM73Q86UV7 250 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 LRRC6Q86X45 466 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 VRK3Q8IV63 474 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms