RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 NDUFV2P19404 249 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 GDF5P43026 501 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 SLC6A12P48065 614 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 ERVPABLB-1P60509 514 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 PPP2CBP62714 309 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 PPP2CAP67775 309 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 SFSWAPQ12872 951 aaKnown RBP7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 NFE2L1Q14494 772 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 NR6A1Q15406 480 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 WSCD2Q2TBF2 565 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 UGT3A2Q3SY77 523 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 FBXO43Q4G163 708 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 TMEM259Q4ZIN3 620 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 TTC23LQ6PF05 361 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 IL27RAQ6UWB1 636 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 CHSY3Q70JA7 882 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 LARP4Q71RC2 724 aaKnown RBP eCLIP7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 FAM124AQ86V42 546 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 HORMAD1Q86X24 394 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 MYLK4Q86YV6 388 aaPredicted RBP7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 TMPRSS6Q8IU80 811 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 SLC44A3Q8N4M1 653 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 CHCHD4Q8N4Q1 142 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 OXR1Q8N573 874 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 TP53I13Q8NBR0 393 aaPredicted RBP7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 FBXO27Q8NI29 283 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 ATL1Q8WXF7 558 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 ASB11Q8WXH4 323 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 FAM3CQ92520 227 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 KLK6Q92876 244 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 FOXJ1Q92949 421 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 FAM131CQ96AQ9 280 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 RCN3Q96D15 328 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 SIPA1Q96FS4 1042 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 LRCH3Q96II8 777 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 LINC00615Q96LM1 132 aaPredicted RBP7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 C3orf30Q96M34 536 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 MYOCQ99972 504 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 RTKNQ9BST9 563 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 CADM1Q9BY67 442 aaKnown RBP7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 SLC29A3Q9BZD2 475 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 OSBPL6Q9BZF3 934 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 FAM117AQ9C073 453 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 MMADHCQ9H3L0 296 aaPredicted RBP7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 TUBB1Q9H4B7 451 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 SLC32A1Q9H598 525 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 ACTR8Q9H981 624 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 TRIM39Q9HCM9 518 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 FZD3Q9NPG1 666 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 KLC4Q9NSK0 619 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 DNAJC11Q9NVH1 559 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 KLQ9UEF7 1012 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 GIMAP2Q9UG22 337 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 ZNF225Q9UK10 706 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 MMP17Q9ULZ9 603 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 NDRG2Q9UN36 371 aaKnown RBP7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 NCKAP1Q9Y2A7 1128 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 GPR89AB7ZAQ6 455 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 PSMD12O00232 456 aaPredicted RBP7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 NR5A2O00482 541 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 FFAR3O14843 346 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 GPR42O15529 346 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 WFS1O76024 890 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 ATP6V1G2O95670 118 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 SLC35G4P0C7Q5 338 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 EBLN1P0CF75 366 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 GPR89BP0CG08 455 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 PRR35P0CG20 571 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 THRAP10827 490 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 GLULP15104 373 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 FOSL2P15408 326 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 ITGAXP20702 1163 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 ITPKAP23677 461 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 MAT2AP31153 395 aaKnown RBP7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 PGM1P36871 562 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 TBPL1P62380 186 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 IRX1P78414 480 aaPredicted RBP7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 PLOD1Q02809 727 aaPredicted RBP7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 ABRQ12979 859 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 SGCGQ13326 291 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 CCINQ13939 588 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 CYLC2Q14093 348 aaPredicted RBP7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 PTK2BQ14289 1009 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 FGL2Q14314 439 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 MLF2Q15773 248 aaPredicted RBP7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 SMAD2Q15796 467 aaKnown RBP7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 IMPG1Q17R60 797 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 PTCHD3Q3KNS1 767 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 GGTA1PQ4G0N0 100 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 ZNF658BQ4V348 819 aaPredicted RBP7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 ATP6AP1LQ52LC2 224 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 AGKQ53H12 422 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 REP15Q6BDI9 236 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 OGFOD2Q6N063 350 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 SCIMPQ6UWF3 145 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 C16orf89Q6UX73 402 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 UNC5DQ6UXZ4 953 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 USP30Q70CQ3 517 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 MILR1Q7Z6M3 343 aa7.87□□□□□ -1.15
PDZRN3-212ENST00000498048 PDZD3Q86UT5 571 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms