RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MED13Q9UHV7 2174 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 HCRTR1O43613 425 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 DNAJB5O75953 348 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 FGGP02679 453 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 CAPN1P07384 714 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 CCR7P32248 378 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 CSE1LP55060 971 aaKnown RBP13.81□□□□□ -0.2
VTI1A-209ENST00000496445 CRADDP78560 199 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 CCZ1BP86790 482 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 CCZ1P86791 482 aaPredicted RBP13.81□□□□□ -0.2
VTI1A-209ENST00000496445 KCNC4Q03721 635 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 ZIC1Q15915 447 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 UGT8Q16880 541 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 COLEC12Q5KU26 742 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 FAM69BQ5VUD6 431 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 CPZQ66K79 652 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 NLRP9Q7RTR0 991 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 SYVN1Q86TM6 617 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 VRK3Q8IV63 474 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 C19orf47Q8N9M1 422 aaKnown RBP13.81□□□□□ -0.2
VTI1A-209ENST00000496445 PPHLN1Q8NEY8 458 aaKnown RBP13.81□□□□□ -0.2
VTI1A-209ENST00000496445 OR6P1Q8NGX9 317 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 CPT1BQ92523 772 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 PEX13Q92968 403 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 OR2A14Q96R47 310 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 TRIM55Q9BYV6 548 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 FAM60AQ9NP50 221 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 TREX1Q9NSU2 369 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 DRG1Q9Y295 367 aaKnown RBP13.81□□□□□ -0.2
VTI1A-209ENST00000496445 MAN2B2Q9Y2E5 1009 aa13.81□□□□□ -0.2
VTI1A-209ENST00000496445 PRRC2CQ9Y520 2896 aaKnown RBP13.81□□□□□ -0.2
VTI1A-209ENST00000496445 NBASA2RRP1 2371 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 IQCF5A8MTL0 148 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 H3BMH7 237 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 MEN1O00255 615 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 RFPL1O75677 317 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 PDGFAP04085 211 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 CHRM5P08912 532 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-209ENST00000496445 CCDC175P0C221 793 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 SHMT2P34897 504 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 KCNJ1P48048 391 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 GABRA4P48169 554 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 SESN2P58004 480 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-209ENST00000496445 PRAMEP78395 509 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 DEFB110Q30KQ9 67 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 FASTKD1Q53R41 847 aaKnown RBP13.8□□□□□ -0.2
VTI1A-209ENST00000496445 PCID2Q5JVF3 399 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 ZNF385CQ66K41 422 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-209ENST00000496445 APLFQ8IW19 511 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-209ENST00000496445 LRRC8AQ8IWT6 810 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 SYTL1Q8IYJ3 562 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 SLC22A15Q8IZD6 547 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 ENDOVQ8N8Q3 282 aaKnown RBP13.8□□□□□ -0.2
VTI1A-209ENST00000496445 ADAMTS17Q8TE56 1095 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 MENTQ9BUN1 341 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 AP1M1Q9BXS5 423 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 ACTR5Q9H9F9 607 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-209ENST00000496445 SYTL2Q9HCH5 934 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 CATSPERZQ9NTU4 200 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 POLG2Q9UHN1 485 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 TLK1Q9UKI8 766 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 FARSAQ9Y285 508 aaKnown RBP13.8□□□□□ -0.2
VTI1A-209ENST00000496445 ZKSCAN5Q9Y2L8 839 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 TDRKHQ9Y2W6 561 aaKnown RBP13.8□□□□□ -0.2
VTI1A-209ENST00000496445 CCDC88CQ9P219 2028 aa13.8□□□□□ -0.2
VTI1A-209ENST00000496445 SEC16AO15027 2179 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 GPC4O75487 556 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 CTSBP07858 339 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 RAB40ALP0C0E4 278 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 CYP2A7P20853 494 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 NMBRP28336 390 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 PKLRP30613 574 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 CASRP41180 1078 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 ITGA1P56199 1179 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 RPS15P62841 145 aaKnown RBP13.79□□□□□ -0.2
VTI1A-209ENST00000496445 BASP1P80723 227 aaKnown RBP13.79□□□□□ -0.2
VTI1A-209ENST00000496445 PLOD1Q02809 727 aaPredicted RBP13.79□□□□□ -0.2
VTI1A-209ENST00000496445 GRB7Q14451 532 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 PTCHD3Q3KNS1 767 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 KRT222Q8N1A0 295 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 LMNTD1Q8N9Z9 388 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 LINC01555Q8NAE3 123 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 SEC14L1Q92503 715 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 CLIP3Q96DZ5 547 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 CARD6Q9BX69 1037 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 OR6C2Q9NZP2 312 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 ANAPC2Q9UJX6 822 aa13.79□□□□□ -0.2
VTI1A-209ENST00000496445 NUP210LQ5VU65 1888 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 LRRK2Q5S007 2527 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 A0A0J9YY10 115 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 TCRBV7S3A2A0A539 114 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 E7EQ34 232 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 MKRN2OSH3BPM6 223 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 CD3EAPO15446 510 aaKnown RBP13.78□□□□□ -0.2
VTI1A-209ENST00000496445 ZNF749O43361 778 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 KLK3P07288 261 aaPredicted RBP13.78□□□□□ -0.2
VTI1A-209ENST00000496445 ARNTP27540 789 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 AOAHP28039 575 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 CXCR5P32302 372 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 HSPA14Q0VDF9 509 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms