RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 XKR5Q6UX68 686 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 TIFABQ6ZNK6 161 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 ADAMTSL2Q86TH1 951 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 OOSP2Q86WS3 158 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 C17orf82Q86X59 251 aaPredicted RBP7.4□□□□□ -1.22
VEGFA-214ENST00000493786 SFTPA2Q8IWL1 248 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 GOLGA6L1Q8N7Z2 621 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 WDR48Q8TAF3 677 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 BAHD1Q8TBE0 780 aaPredicted RBP7.4□□□□□ -1.22
VEGFA-214ENST00000493786 ACMSDQ8TDX5 336 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 ASB11Q8WXH4 323 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 ANKRD7Q92527 254 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 RAD51AP1Q96B01 352 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 PDLIM5Q96HC4 596 aaKnown RBP7.4□□□□□ -1.22
VEGFA-214ENST00000493786 SCYL1Q96KG9 808 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 ZIM3Q96PE6 472 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 CCDC3Q9BQI4 270 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 TMEM109Q9BVC6 243 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 IQCGQ9H095 443 aaKnown RBP7.4□□□□□ -1.22
VEGFA-214ENST00000493786 ACBD3Q9H3P7 528 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 SRMSQ9H3Y6 488 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 PARVBQ9HBI1 364 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 PCMTD2Q9NV79 361 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 SPATA7Q9P0W8 599 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 LNPEPQ9UIQ6 1025 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 RNF112Q9ULX5 631 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 RUVBL2Q9Y230 463 aaKnown RBP7.4□□□□□ -1.22
VEGFA-214ENST00000493786 NFS1Q9Y697 457 aa7.4□□□□□ -1.22
VEGFA-214ENST00000493786 ZNF292O60281 2723 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 PTPRZ1P23471 2315 aaPredicted RBP7.39□□□□□ -1.23
VEGFA-214ENST00000493786 LY6G6EA0A0G2JKS1 128 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 CCDC189A1A4V9 331 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 HMX2A2RU54 273 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 GSAPA4D1B5 854 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 FAM221BA6H8Z2 402 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 SYCE1LA8MT33 242 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 ARHGEF33A8MVX0 844 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 GFYI3L273 518 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 MATN2O00339 956 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 PPM1DO15297 605 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 UBXN7O94888 489 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 KLHL2O95198 593 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 C1orf105O95561 183 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 TSPAN12O95859 305 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 RPLP0P05388 317 aaKnown RBP7.39□□□□□ -1.23
VEGFA-214ENST00000493786 PROS1P07225 676 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 CD1DP15813 335 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 H2AFXP16104 143 aaPredicted RBP7.39□□□□□ -1.23
VEGFA-214ENST00000493786 TFEBP19484 476 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 HSD17B2P37059 387 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 ACADVLP49748 655 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 RAB28P51157 221 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 PGGT1BP53609 377 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 AP1S2P56377 157 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 OR1D5P58170 312 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 SIM1P81133 766 aaPredicted RBP7.39□□□□□ -1.23
VEGFA-214ENST00000493786 E2F1Q01094 437 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 ZNF844Q08AG5 666 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 SPIDRQ14159 915 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 CASP8Q14790 479 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 FBXO38Q6PIJ6 1188 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 TMEM207Q6UWW9 146 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 ZNF438Q7Z4V0 828 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 SPRED1Q7Z699 444 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 GLRX5Q86SX6 157 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 LCA5Q86VQ0 697 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 AMIGO1Q86WK6 493 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 ZNF761Q86XN6 746 aaPredicted RBP7.39□□□□□ -1.23
VEGFA-214ENST00000493786 IQCKQ8N0W5 287 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 SPATA6LQ8N4H0 392 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 FBXO15Q8NCQ5 510 aaPredicted RBP7.39□□□□□ -1.23
VEGFA-214ENST00000493786 OR4E2Q8NGC2 313 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 OR52E1Q8NGJ3 308 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 OR9A1PQ8NGU1 263 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 STAG3L4Q8TBR4 150 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 KCTD4Q8WVF5 259 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 ANKRD49Q8WVL7 239 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 ATL1Q8WXF7 558 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 JPH3Q8WXH2 748 aaPredicted RBP7.39□□□□□ -1.23
VEGFA-214ENST00000493786 ISL2Q96A47 359 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 PKNOX2Q96KN3 472 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 GFM1Q96RP9 751 aaKnown RBP7.39□□□□□ -1.23
VEGFA-214ENST00000493786 EGFL8Q99944 293 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 DPYSL5Q9BPU6 564 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 SLC12A9Q9BXP2 914 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 UNKQ9C0B0 810 aaKnown RBP7.39□□□□□ -1.23
VEGFA-214ENST00000493786 TFB2MQ9H5Q4 396 aaKnown RBP7.39□□□□□ -1.23
VEGFA-214ENST00000493786 ARL15Q9NXU5 204 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 OR6C2Q9NZP2 312 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 SENP1Q9P0U3 644 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.39□□□□□ -1.23
VEGFA-214ENST00000493786 LGALS13Q9UHV8 139 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 NOVA2Q9UNW9 492 aaKnown RBP7.39□□□□□ -1.23
VEGFA-214ENST00000493786 PCDHGA1Q9Y5H4 931 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 U3KQA8 63 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 USP34Q70CQ2 3546 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 GVINP1Q7Z2Y8 2422 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 PIKFYVEQ9Y2I7 2098 aa7.39□□□□□ -1.23
VEGFA-214ENST00000493786 IGHV1OR21-1A0A087WYE8 117 aa7.38□□□□□ -1.23
VEGFA-214ENST00000493786 PRAMEF33A0A0G2JMD5 474 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms