RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 CASC4Q6P4E1 433 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 CCDC81Q6ZN84 652 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 TRIM73Q86UV7 250 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 HOOK3Q86VS8 718 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 CACNA2D3Q8IZS8 1091 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 CARFQ8N187 725 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 SLC38A9Q8NBW4 561 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 DENND1AQ8TEH3 1009 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 ASZ1Q8WWH4 475 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 ELMO2Q96JJ3 720 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 IL17FQ96PD4 163 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 TRAPPC9Q96Q05 1148 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 ZPBPQ9BS86 351 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 KLHL25Q9H0H3 589 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 TRIT1Q9H3H1 467 aaKnown RBP13.22□□□□□ -0.29
PDCD11-206ENST00000493610 FAM60AQ9NP50 221 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 FBXO6Q9NRD1 293 aaPredicted RBP13.22□□□□□ -0.29
PDCD11-206ENST00000493610 C1GALT1Q9NS00 363 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.22□□□□□ -0.29
PDCD11-206ENST00000493610 ASIC3Q9UHC3 531 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 IL17BQ9UHF5 180 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 GNPTGQ9UJJ9 305 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 FER1L5A0AVI2 2057 aa13.22□□□□□ -0.29
PDCD11-206ENST00000493610 ATXN7O15265 892 aaPredicted RBP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 SEC31AO94979 1220 aaKnown RBP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 MATN4O95460 622 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 ZBTB11O95625 1053 aaPredicted RBP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 PKMP14618 531 aaKnown RBP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 UGT2B7P16662 529 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 PPARGP37231 505 aaPredicted RBP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 STAT5AP42229 794 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 RPL21P46778 160 aaKnown RBP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 CLCN7P51798 805 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 ETF1P62495 437 aaKnown RBP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 CYP4F2P78329 520 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 HSD11B2P80365 405 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 MPP1Q00013 466 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 DR1Q01658 176 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 TUBB3Q13509 450 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 KRT33BQ14525 404 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 CRYMQ14894 314 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 SYTL3Q4VX76 610 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 ACSBG2Q5FVE4 666 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 MANEAQ5SRI9 462 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 PLEKHS1Q5SXH7 462 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 ZNF470Q6ECI4 717 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 PTRHD1Q6GMV3 140 aaKnown RBP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 CNSTQ6PJW8 725 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 SYDE1Q6ZW31 735 aaPredicted RBP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 FAM20CQ8IXL6 584 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 NLGN4XQ8N0W4 816 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 SIDT2Q8NBJ9 832 aaKnown RBP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 GALNT6Q8NCL4 622 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 NLGN4YQ8NFZ3 816 aaPredicted RBP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 FAM136AQ96C01 138 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 STAMBPL1Q96FJ0 436 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 UBL7Q96S82 380 aaPredicted RBP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 EBNA1BP2Q99848 306 aaKnown RBP13.21□□□□□ -0.29
PDCD11-206ENST00000493610 SEMA4CQ9C0C4 833 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 FGF21Q9NSA1 209 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 SAMD15Q9P1V8 674 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 SLC17A6Q9P2U8 582 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 TEX264Q9Y6I9 313 aa13.21□□□□□ -0.29
PDCD11-206ENST00000493610 SMG1Q96Q15 3661 aaKnown RBP13.2□□□□□ -0.3
PDCD11-206ENST00000493610 GSAPA4D1B5 854 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 CCDC188H7C350 402 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 KIAA0754O94854 1291 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 HAUS5O94927 633 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 C1orf105O95561 183 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 ESR1P03372 595 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 APOA4P06727 396 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 MSL3P1P0C860 447 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 PGAM1P18669 254 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 MAP4P27816 1152 aaKnown RBP13.2□□□□□ -0.3
PDCD11-206ENST00000493610 SHMT2P34897 504 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 BDKRB1P46663 353 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 ITGA8P53708 1063 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 MORF4L2Q15014 288 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 LONRF1Q17RB8 773 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 HSP90AA5PQ58FG0 334 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.2□□□□□ -0.3
PDCD11-206ENST00000493610 RNF187Q5TA31 235 aaPredicted RBP13.2□□□□□ -0.3
PDCD11-206ENST00000493610 LCN10Q6JVE6 187 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 ZNF449Q6P9G9 518 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 TRMT10BQ6PF06 316 aaKnown RBP13.2□□□□□ -0.3
PDCD11-206ENST00000493610 SPESP1Q6UW49 350 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 UNC5DQ6UXZ4 953 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 SYT10Q6XYQ8 523 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 CYHR1Q6ZMK1 362 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 CDHR3Q6ZTQ4 885 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 SDCCAG8Q86SQ7 713 aaPredicted RBP13.2□□□□□ -0.3
PDCD11-206ENST00000493610 OR1L3Q8NH93 324 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 PANX3Q96QZ0 392 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 RUFY1Q96T51 708 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 KRT12Q99456 494 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 ULBP3Q9BZM4 244 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 C20orf96Q9NUD7 363 aaPredicted RBP13.2□□□□□ -0.3
PDCD11-206ENST00000493610 INTS10Q9NVR2 710 aaKnown RBP13.2□□□□□ -0.3
PDCD11-206ENST00000493610 RNF14Q9UBS8 474 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms