RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 MYL2P10916 166 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 CPA3P15088 417 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 CHN1P15882 459 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 XRCC1P18887 633 aaPredicted RBP13.01□□□□□ -0.33
TRAIP-210ENST00000489948 MAP4P27816 1152 aaKnown RBP13.01□□□□□ -0.33
TRAIP-210ENST00000489948 FASLGP48023 281 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 KCNC1P48547 511 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 PRKAA2P54646 552 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 DNAJB13P59910 316 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 ABRQ12979 859 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 C6orf132Q5T0Z8 1188 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 OGFOD3Q6PK18 319 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 KLHDC8AQ8IYD2 350 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 NAGSQ8N159 534 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 ANKRD42Q8N9B4 389 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 RAB3IL1Q8TBN0 382 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 MCOLN3Q8TDD5 553 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 SAP25Q8TEE9 199 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 ZDHHC1Q8WTX9 485 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 RAD51AP1Q96B01 352 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 FBXL8Q96CD0 374 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 CCDC138Q96M89 665 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 RAB11FIP5Q9BXF6 653 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 C1QTNF3Q9BXJ4 246 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 TRIM54Q9BYV2 358 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 C12orf65Q9H3J6 166 aaKnown RBP13.01□□□□□ -0.33
TRAIP-210ENST00000489948 GAREM1Q9H706 876 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 KIR3DX1Q9H7L2 352 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 NLGN3Q9NZ94 848 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 SCHIP1Q9P0W5 487 aaPredicted RBP13.01□□□□□ -0.33
TRAIP-210ENST00000489948 SPATA7Q9P0W8 599 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 SIRPGQ9P1W8 387 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 CPSF2Q9P2I0 782 aaKnown RBP13.01□□□□□ -0.33
TRAIP-210ENST00000489948 TSR3Q9UJK0 312 aaKnown RBP13.01□□□□□ -0.33
TRAIP-210ENST00000489948 GMEB2Q9UKD1 530 aa13.01□□□□□ -0.33
TRAIP-210ENST00000489948 ARID1BQ8NFD5 2236 aaPredicted RBP13□□□□□ -0.33
TRAIP-210ENST00000489948 COL5A1P20908 1838 aaPredicted RBP13□□□□□ -0.33
TRAIP-210ENST00000489948 OR52A4PA6NMU1 304 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 SUPT3HB4E1H0 165 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 UBXN8O00124 270 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 YY2O15391 372 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 KDM1AO60341 852 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 H2AFYO75367 372 aaKnown RBP13□□□□□ -0.33
TRAIP-210ENST00000489948 SUPT3HO75486 399 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 ANXA6P08133 673 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 ANXA5P08758 320 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 HIST1H2AGP0C0S8 130 aaPredicted RBP13□□□□□ -0.33
TRAIP-210ENST00000489948 ZNF806P0C7X5 589 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 GIMD1P0DJR0 217 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 ENGP17813 658 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 HIST1H2ADP20671 130 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 GGT5P36269 586 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 HSD17B2P37059 387 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 BDKRB1P46663 353 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 RPIAP49247 311 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 ALDH18A1P54886 795 aaKnown RBP13□□□□□ -0.33
TRAIP-210ENST00000489948 NAA20P61599 178 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 IRX4P78413 519 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 ASPHQ12797 758 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 C1orf61Q13536 156 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 GRB7Q14451 532 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 ARHGAP19Q14CB8 494 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 SETDB1Q15047 1291 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 HHATQ5VTY9 493 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 LIPMQ5VYY2 423 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 SULT1C3Q6IMI6 304 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 TTC23LQ6PF05 361 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 CCDC63Q8NA47 563 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 FAM46DQ8NEK8 389 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 OR5AR1Q8NGP9 310 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 CFAP61Q8NHU2 1237 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 SLC37A2Q8TED4 501 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 SREK1Q8WXA9 508 aaKnown RBP13□□□□□ -0.33
TRAIP-210ENST00000489948 ATL1Q8WXF7 558 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 RHBDF1Q96CC6 855 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 HIST1H2AHQ96KK5 128 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 HIST1H2AJQ99878 128 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 H2AFJQ9BTM1 129 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 MENTQ9BUN1 341 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 DUSP23Q9BVJ7 150 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 TWSG1Q9GZX9 223 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 CAAP1Q9H8G2 361 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 UCK1Q9HA47 277 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 IMP3Q9NV31 184 aaKnown RBP13□□□□□ -0.33
TRAIP-210ENST00000489948 INTS9Q9NV88 658 aaKnown RBP13□□□□□ -0.33
TRAIP-210ENST00000489948 OXSMQ9NWU1 459 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 UCKL1Q9NWZ5 548 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 ARL15Q9NXU5 204 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 ZNF624Q9P2J8 865 aaPredicted RBP13□□□□□ -0.33
TRAIP-210ENST00000489948 DOLKQ9UPQ8 538 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 PCDHGB2Q9Y5G2 931 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 COLEC10Q9Y6Z7 277 aa13□□□□□ -0.33
TRAIP-210ENST00000489948 LNP1A1A4G5 178 aa12.99□□□□□ -0.33
TRAIP-210ENST00000489948 FAM221BA6H8Z2 402 aa12.99□□□□□ -0.33
TRAIP-210ENST00000489948 ZNF839A8K0R7 811 aa12.99□□□□□ -0.33
TRAIP-210ENST00000489948 B4DGG1 531 aa12.99□□□□□ -0.33
TRAIP-210ENST00000489948 NOBOXO60393 691 aa12.99□□□□□ -0.33
TRAIP-210ENST00000489948 DLX3O60479 287 aa12.99□□□□□ -0.33
TRAIP-210ENST00000489948 SDC3O75056 442 aa12.99□□□□□ -0.33
TRAIP-210ENST00000489948 S100BP04271 92 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms