RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 B4DXG7 233 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 TARM1B6A8C7 271 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 F8W036 122 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 BTN3A3O00478 584 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 EFSO43281 561 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SEC14L5O43304 696 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 XPNPEP2O43895 674 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 DLX3O60479 287 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SNAPINO95295 136 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 PAPSS2O95340 614 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ECDO95905 644 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 F9P00740 461 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 APOC1P02654 83 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 MT-ND2P03891 347 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CYP11A1P05108 521 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 RPLP0P05388 317 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 POLBP06746 335 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 PROS1P07225 676 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 VSIG8P0DPA2 414 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ERVK-10P10266 1014 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 RRASP10301 218 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CYP2C8P10632 490 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 MIPP30301 263 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 HIBADHP31937 336 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 TGFBR1P36897 503 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 BRCC3P46736 316 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 PPP3CCP48454 512 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 MASP1P48740 699 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 NR2C2P49116 596 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CSRP3P50461 194 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SCNN1GP51170 649 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 DGKQP52824 942 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 BCAR1P56945 870 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SNRPD2P62316 118 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 IRF9Q00978 393 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 LIPEQ05469 1076 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 POU5F1BQ06416 359 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 MAB21L1Q13394 359 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 COL9A2Q14055 689 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 QRICH1Q2TAL8 776 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ZACNQ401N2 412 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM98BQ52LJ0 330 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 TOR1AIP1Q5JTV8 583 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SUSD4Q5VX71 490 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 FCRLBQ6BAA4 426 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 MRM1Q6IN84 353 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 C6orf15Q6UXA7 325 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 LIPIQ6XZB0 460 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 PIWIL4Q7Z3Z4 852 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 STRA8Q7Z7C7 330 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 MRPL10Q7Z7H8 261 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM124AQ86V42 546 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ZC3HC1Q86WB0 502 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 KIAA0319LQ8IZA0 1049 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 PQLC3Q8N755 202 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF557Q8N988 423 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ATAD1Q8NBU5 361 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CDC26Q8NHZ8 85 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 GATAD2BQ8WXI9 593 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ARNTL2Q8WYA1 636 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 YIPF5Q969M3 257 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 TMEM125Q96AQ2 219 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 REPS1Q96D71 796 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CERS2Q96G23 380 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 FOPNLQ96NB1 174 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 TRNT1Q96Q11 434 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SEPHS2Q99611 448 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF416Q9BWM5 594 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 C1QTNF1Q9BXJ1 281 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 TASP1Q9H6P5 420 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SMURF2Q9HAU4 748 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ZBTB20Q9HC78 741 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CYP4F12Q9HCS2 524 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 DYRK4Q9NR20 520 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ASAH2Q9NR71 780 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ERVK13-1Q9NX77 482 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ARHGAP28Q9P2N2 729 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 DNAJB9Q9UBS3 223 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 TBX20Q9UMR3 447 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ERVW-1Q9UQF0 538 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 RUVBL2Q9Y230 463 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 RNF6Q9Y252 685 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 MRPS7Q9Y2R9 242 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 MFHAS1Q9Y4C4 1052 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 HES2Q9Y543 173 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ORC6Q9Y5N6 252 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CNTNAP4Q9C0A0 1308 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 IGLV3-22A0A075B6J6 115 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 IGKV6D-41A0A0C4DH26 115 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 A0A0J9YYE9 177 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 E2F8A0AVK6 867 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 CIB4A0PJX0 185 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 ZBTB42B2RXF5 422 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 TMEM233B4DJY2 109 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 FXYD1O00168 92 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 POLRMTO00411 1230 aaKnown RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 APOL1O14791 398 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 BCKDKO14874 412 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 IFNA7P01567 189 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 F11P03951 625 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms