RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 ANAPC5Q9UJX4 755 aa12.15□□□□□ -0.46
SRRM1-216ENST00000489130 CDYLQ9Y232 598 aa12.15□□□□□ -0.46
SRRM1-216ENST00000489130 TLN1Q9Y490 2541 aaKnown RBP12.15□□□□□ -0.46
SRRM1-216ENST00000489130 SPENQ96T58 3664 aaKnown RBP12.14□□□□□ -0.47
SRRM1-216ENST00000489130 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.14□□□□□ -0.47
SRRM1-216ENST00000489130 CDC14CA4D256 554 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 IQCF5A8MTL0 148 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 MEN1O00255 615 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 PRMT5O14744 637 aaPredicted RBP12.14□□□□□ -0.47
SRRM1-216ENST00000489130 CD3EAPO15446 510 aaKnown RBP12.14□□□□□ -0.47
SRRM1-216ENST00000489130 NRDCO43847 1150 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 GPC4O75487 556 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 ZIC2O95409 532 aaPredicted RBP12.14□□□□□ -0.47
SRRM1-216ENST00000489130 KLK3P07288 261 aaPredicted RBP12.14□□□□□ -0.47
SRRM1-216ENST00000489130 CHRM5P08912 532 aaPredicted RBP12.14□□□□□ -0.47
SRRM1-216ENST00000489130 ARNTP27540 789 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 NMBRP28336 390 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 NPY2RP49146 381 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 PMS2P54278 862 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 RPS15P62841 145 aaKnown RBP12.14□□□□□ -0.47
SRRM1-216ENST00000489130 HSPA14Q0VDF9 509 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 UGT8Q16880 541 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 PLEKHS1Q5SXH7 462 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 LRRC8BQ6P9F7 803 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 CDHR3Q6ZTQ4 885 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 SYVN1Q86TM6 617 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 LDB1Q86U70 411 aaPredicted RBP12.14□□□□□ -0.47
SRRM1-216ENST00000489130 TMEM135Q86UB9 458 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 VRK3Q8IV63 474 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 C19orf47Q8N9M1 422 aaKnown RBP12.14□□□□□ -0.47
SRRM1-216ENST00000489130 LKAAEAR1Q8TD35 194 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 ASZ1Q8WWH4 475 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 MR1Q95460 341 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 ABHD17AQ96GS6 310 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 MENTQ9BUN1 341 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 KIFC1Q9BW19 673 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 KLHL25Q9H0H3 589 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 P2RY12Q9H244 342 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 CHST8Q9H2A9 424 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 PCMTD2Q9NV79 361 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 SPHK1Q9NYA1 384 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 TDRKHQ9Y2W6 561 aaKnown RBP12.14□□□□□ -0.47
SRRM1-216ENST00000489130 PIKFYVEQ9Y2I7 2098 aa12.14□□□□□ -0.47
SRRM1-216ENST00000489130 A0A0J9YY10 115 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 TCRBV7S3A2A0A539 114 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 E7EQ34 232 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 H3BMH7 237 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 PYCARD-AS1I3L0S3 204 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 KDM1AO60341 852 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 SLCO2B1O94956 709 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 WISP1O95388 367 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 APOA4P06727 396 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 RAB40ALP0C0E4 278 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 CYP2A7P20853 494 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 RPS3P23396 243 aaKnown RBP eCLIP12.13□□□□□ -0.47
SRRM1-216ENST00000489130 MGAT1P26572 445 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 AOAHP28039 575 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 PEBP1P30086 187 aaKnown RBP12.13□□□□□ -0.47
SRRM1-216ENST00000489130 PKLRP30613 574 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 MAGEA6P43360 314 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 CSRP3P50461 194 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 CSE1LP55060 971 aaKnown RBP12.13□□□□□ -0.47
SRRM1-216ENST00000489130 ITGA1P56199 1179 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 RPS18P62269 152 aaKnown RBP12.13□□□□□ -0.47
SRRM1-216ENST00000489130 IL10RAQ13651 578 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 KCNJ11Q14654 390 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 KIR2DS3Q14952 304 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 ZIC1Q15915 447 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 LACTB2Q53H82 288 aaPredicted RBP12.13□□□□□ -0.47
SRRM1-216ENST00000489130 ARMC3Q5W041 872 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 FAM198BQ6UWH4 519 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 UNC5DQ6UXZ4 953 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 TRIM73Q86UV7 250 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 HOOK3Q86VS8 718 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 LRRC6Q86X45 466 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 PTRH1Q86Y79 214 aaKnown RBP12.13□□□□□ -0.47
SRRM1-216ENST00000489130 APLFQ8IW19 511 aaPredicted RBP12.13□□□□□ -0.47
SRRM1-216ENST00000489130 RASGEF1CQ8N431 466 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 THAP4Q8WY91 577 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 CLIP3Q96DZ5 547 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 MFSD3Q96ES6 412 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 TCTN2Q96GX1 697 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 NLNQ9BYT8 704 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 TRIM4Q9C037 500 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 ACTR5Q9H9F9 607 aaPredicted RBP12.13□□□□□ -0.47
SRRM1-216ENST00000489130 FAM60AQ9NP50 221 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 ZNF71Q9NQZ8 489 aaPredicted RBP12.13□□□□□ -0.47
SRRM1-216ENST00000489130 SYBUQ9NX95 663 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 SERTAD3Q9UJW9 196 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 PLAGL1Q9UM63 463 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 FARSAQ9Y285 508 aaKnown RBP12.13□□□□□ -0.47
SRRM1-216ENST00000489130 MAN2B2Q9Y2E5 1009 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 JRKLQ9Y4A0 524 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 TENM4Q6N022 2769 aa12.13□□□□□ -0.47
SRRM1-216ENST00000489130 SPTA1P02549 2419 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 MKRN2OSH3BPM6 223 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 RFPL1O75677 317 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 RPN2P04844 631 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 CAPN1P07384 714 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 GABRA4P48169 554 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms