RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 C17orf62Q9BQA9 187 aa12.64□□□□□ -0.39
ATPAF2-207ENST00000488753 TSSK1BQ9BXA7 367 aa12.64□□□□□ -0.39
ATPAF2-207ENST00000488753 SLC7A5P2Q9GIP4 190 aa12.64□□□□□ -0.39
ATPAF2-207ENST00000488753 ING2Q9H160 280 aa12.64□□□□□ -0.39
ATPAF2-207ENST00000488753 MLXIPLQ9NP71 852 aa12.64□□□□□ -0.39
ATPAF2-207ENST00000488753 EIF2B3Q9NR50 452 aaKnown RBP12.64□□□□□ -0.39
ATPAF2-207ENST00000488753 SLC2A6Q9UGQ3 507 aa12.64□□□□□ -0.39
ATPAF2-207ENST00000488753 TCFL5Q9UL49 500 aa12.64□□□□□ -0.39
ATPAF2-207ENST00000488753 SNX7Q9UNH6 387 aa12.64□□□□□ -0.39
ATPAF2-207ENST00000488753 TCAF1Q9Y4C2 921 aa12.64□□□□□ -0.39
ATPAF2-207ENST00000488753 AP1M2Q9Y6Q5 423 aa12.64□□□□□ -0.39
ATPAF2-207ENST00000488753 SPENQ96T58 3664 aaKnown RBP12.64□□□□□ -0.39
ATPAF2-207ENST00000488753 C9J4A7 227 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 K7EM74 188 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 AP3B1O00203 1094 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 OR1I1O60431 355 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 RPN2P04844 631 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 CAPN1P07384 714 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 APRTP07741 180 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 PVRP15151 417 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 UGT2B7P16662 529 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 NR1D1P20393 614 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 AGXTP21549 392 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 GRIA1P42261 906 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 PGDP52209 483 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 KIR2DS3Q14952 304 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 NCF4Q15080 339 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 RPS6KA1Q15418 735 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 FASTKD1Q53R41 847 aaKnown RBP12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 MEI1Q5TIA1 1274 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 FAM198BQ6UWH4 519 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 ZNF662Q6ZS27 426 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 ZNF534Q76KX8 674 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 SLC22A15Q8IZD6 547 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 PPHLN1Q8NEY8 458 aaKnown RBP12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 OR6P1Q8NGX9 317 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 C1orf54Q8WWF1 131 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 ASZ1Q8WWH4 475 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 N4BP2L2Q92802 583 aaPredicted RBP12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 NRTNQ99748 197 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 TRIM55Q9BYV6 548 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 ACSS2Q9NR19 701 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 GUCA1BQ9UMX6 200 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 PADI2Q9Y2J8 665 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 ZKSCAN5Q9Y2L8 839 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 PCDHGB7Q9Y5F8 929 aa12.63□□□□□ -0.39
ATPAF2-207ENST00000488753 HECTD1Q9ULT8 2610 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 A0A0J9YY10 115 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 H3BMH7 237 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 ZNF749O43361 778 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 GPC4O75487 556 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 DNAJB5O75953 348 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 OR2B3O76000 313 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 CD63P08962 238 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 TPBGLP0DKB5 382 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 CCR7P32248 378 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 CD97P48960 835 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 TTPAP49638 278 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 RAB28P51157 221 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 BRD3Q15059 726 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 CCNG2Q16589 344 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 SLC5A12Q1EHB4 618 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 PCID2Q5JVF3 399 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 ZNF385CQ66K41 422 aaPredicted RBP12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 LCN10Q6JVE6 187 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 MED25Q71SY5 747 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 HPS6Q86YV9 775 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 MPP5Q8N3R9 675 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 TMEM102Q8N9M5 508 aaPredicted RBP12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 FLVCR1-AS1Q8TAF5 88 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 PROKR1Q8TCW9 393 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 MAIP1Q8WWC4 291 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 MIB2Q96AX9 1013 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 ZNF778Q96MU6 729 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 SLC25A23Q9BV35 468 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 CARD6Q9BX69 1037 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 AP1M1Q9BXS5 423 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 KLHL25Q9H0H3 589 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 FAM60AQ9NP50 221 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 G3BP2Q9UN86 482 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 SRPK3Q9UPE1 567 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 CDYLQ9Y232 598 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 DRG1Q9Y295 367 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 TDRKHQ9Y2W6 561 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 NBASA2RRP1 2371 aa12.62□□□□□ -0.39
ATPAF2-207ENST00000488753 ARGFXA6NJG6 315 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 PRMT5O14744 637 aaPredicted RBP12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 CEACAM4O75871 244 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 TMEM63AO94886 807 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 SLCO2B1O94956 709 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 PDGFAP04085 211 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 APOA4P06727 396 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 RPL22P35268 128 aaKnown RBP12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 PTGIRP43119 386 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 GABRA4P48169 554 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 RRADP55042 308 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 HSPA14Q0VDF9 509 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 SNX1Q13596 522 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 SIX1Q15475 284 aaPredicted RBP12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 ZIC1Q15915 447 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms