RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TAX1BP1Q86VP1 789 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 KMT5CQ86Y97 462 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 PPIL6Q8IXY8 311 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 D2HGDHQ8N465 521 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 C2orf73Q8N5S3 287 aaPredicted RBP11.9□□□□□ -0.5
MSH5-216ENST00000484309 ESX1Q8N693 406 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 OR5K2Q8NHB8 316 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 SKA2Q8WVK7 121 aaPredicted RBP11.9□□□□□ -0.5
MSH5-216ENST00000484309 ASZ1Q8WWH4 475 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 KIAA1143Q96AT1 154 aaPredicted RBP11.9□□□□□ -0.5
MSH5-216ENST00000484309 BIRC8Q96P09 236 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 IL17FQ96PD4 163 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 PANX3Q96QZ0 392 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 SLC12A9Q9BXP2 914 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 SEMA4CQ9C0C4 833 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 SPHK1Q9NYA1 384 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 BTRCQ9Y297 605 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.9□□□□□ -0.5
MSH5-216ENST00000484309 COL6A6A6NMZ7 2263 aa11.9□□□□□ -0.5
MSH5-216ENST00000484309 SMG1Q96Q15 3661 aaKnown RBP11.9□□□□□ -0.51
MSH5-216ENST00000484309 HEATR5BQ9P2D3 2071 aa11.9□□□□□ -0.51
MSH5-216ENST00000484309 FAM237BA0A1B0GVD1 139 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 PIPSLA2A3N6 862 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 MATN2O00339 956 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 DNALI1O14645 258 aaPredicted RBP11.89□□□□□ -0.51
MSH5-216ENST00000484309 NKX2-8O15522 239 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 C1QL1O75973 258 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 CHRM5P08912 532 aaPredicted RBP11.89□□□□□ -0.51
MSH5-216ENST00000484309 PRKAR1AP10644 381 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 UGT2B7P16662 529 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 OGNP20774 298 aaKnown RBP11.89□□□□□ -0.51
MSH5-216ENST00000484309 F8A1P23610 371 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 PEBP1P30086 187 aaKnown RBP11.89□□□□□ -0.51
MSH5-216ENST00000484309 DLSTP36957 453 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 STAT5AP42229 794 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 MAGEA3P43357 314 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 ABHD18Q0P651 414 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 CTBP1Q13363 440 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 LINC00303Q3SY05 128 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 ATP1A1-AS1Q5TC04 95 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 PRAMEF17Q5VTA0 474 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 IZUMO3Q5VZ72 239 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 PAPD7Q5XG87 772 aaKnown RBP11.89□□□□□ -0.51
MSH5-216ENST00000484309 NEPROQ6NW34 567 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 CNSTQ6PJW8 725 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 SPESP1Q6UW49 350 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 CENPUQ71F23 418 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 OTOAQ7RTW8 1153 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 LRRC6Q86X45 466 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 CREG2Q8IUH2 290 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 DENND6AQ8IWF6 608 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 FAM20CQ8IXL6 584 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 ZNF501Q96CX3 271 aaPredicted RBP11.89□□□□□ -0.51
MSH5-216ENST00000484309 SIGLEC10Q96LC7 697 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 TRAPPC9Q96Q05 1148 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 TRIM51Q9BSJ1 452 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 FBXO6Q9NRD1 293 aaPredicted RBP11.89□□□□□ -0.51
MSH5-216ENST00000484309 C1GALT1Q9NS00 363 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 GALPQ9UBC7 116 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 POLG2Q9UHN1 485 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 CROTQ9UKG9 612 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 NFS1Q9Y697 457 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 SAR1BQ9Y6B6 198 aa11.89□□□□□ -0.51
MSH5-216ENST00000484309 MDC1Q14676 2089 aaKnown RBP11.88□□□□□ -0.51
MSH5-216ENST00000484309 ZCWPW2A0A1B0GU75 182 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 CTAGE9A4FU28 777 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 ZNF891A8MT65 544 aaPredicted RBP11.88□□□□□ -0.51
MSH5-216ENST00000484309 ISM1B1AKI9 464 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 TMEM150CB9EJG8 249 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 SCRG1O75711 98 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 PKLRP30613 574 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 SLC1A2P43004 574 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 TUBB4BP68371 445 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 MPP1Q00013 466 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 DHX9Q08211 1270 aaKnown RBP11.88□□□□□ -0.51
MSH5-216ENST00000484309 THOC5Q13769 683 aaKnown RBP11.88□□□□□ -0.51
MSH5-216ENST00000484309 TUBB2AQ13885 445 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 GRB7Q14451 532 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 TBR1Q16650 682 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 DEFB110Q30KQ9 67 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 CCSMST1Q4G0I0 132 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 MSS51Q4VC12 460 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 DNAJC21Q5F1R6 531 aaKnown RBP11.88□□□□□ -0.51
MSH5-216ENST00000484309 HP1BP3Q5SSJ5 553 aaPredicted RBP11.88□□□□□ -0.51
MSH5-216ENST00000484309 RNF187Q5TA31 235 aaPredicted RBP11.88□□□□□ -0.51
MSH5-216ENST00000484309 C16orf46Q6P387 395 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 CYB5D1Q6P9G0 228 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 FAM199XQ6PEV8 388 aaPredicted RBP11.88□□□□□ -0.51
MSH5-216ENST00000484309 TMEM135Q86UB9 458 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 HOOK3Q86VS8 718 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 CILP2Q8IUL8 1156 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 TMEM126BQ8IUX1 230 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 OR1L3Q8NH93 324 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 GSDMBQ8TAX9 411 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 CT55Q8WUE5 264 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 STARD8Q92502 1023 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 PWWP2AQ96N64 755 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 OR2A14Q96R47 310 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 RUFY1Q96T51 708 aa11.88□□□□□ -0.51
MSH5-216ENST00000484309 ARHGAP9Q9BRR9 750 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms