RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TBCDQ9BTW9 1192 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 FARSBQ9NSD9 589 aaKnown RBP20.82■□□□□ 0.92
SDF4-206ENST00000478938 COX16Q9P0S2 106 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 STOML2Q9UJZ1 356 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 GABRQQ9UN88 632 aa20.82■□□□□ 0.92
SDF4-206ENST00000478938 PAPSS2O95340 614 aaPredicted RBP20.81■□□□□ 0.92
SDF4-206ENST00000478938 HSMCR30P0CW71 290 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 DAPP51397 102 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 HERVK_113P63132 956 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 CYP4F2P78329 520 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 RGS1Q08116 209 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 CYP4F3Q08477 520 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 KEAP1Q14145 624 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 TMEM81Q6P7N7 255 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 HHIPL2Q6UWX4 724 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 C16orf62Q7Z3J2 963 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 CHPFQ8IZ52 775 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 IPCEF1Q8WWN9 437 aaPredicted RBP20.81■□□□□ 0.92
SDF4-206ENST00000478938 FCGR1BQ92637 280 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 AKAP1Q92667 903 aaKnown RBP eCLIP20.81■□□□□ 0.926e-11■■■■□ 22.7
SDF4-206ENST00000478938 FAM162AQ96A26 154 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 ERVK-6Q9BXR3 956 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 CCSER2Q9H7U1 834 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 ASAH2Q9NR71 780 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 PCDHGA12O60330 932 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 PPM1BO75688 479 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 KIR2DL3P43628 341 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 CAPSQ13938 189 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 DOK7Q18PE1 504 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 SOWAHAQ2M3V2 549 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 KIAA0319Q5VV43 1072 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 TIGD3Q6B0B8 471 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 NAPEPLDQ6IQ20 393 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 AMIGO3Q86WK7 504 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 LAX1Q8IWV1 398 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 PAF1Q8N7H5 531 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 CDYL2Q8N8U2 506 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 C1orf127Q8N9H9 656 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 FNDC5Q8NAU1 212 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 APH1BQ8WW43 257 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 RIT1Q92963 219 aa20.81■□□□□ 0.92
SDF4-206ENST00000478938 DICER1Q9UPY3 1922 aaKnown RBP20.81■□□□□ 0.92
SDF4-206ENST00000478938 BRCC3P46736 316 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 NRIP1P48552 1158 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 ZNF33BQ06732 778 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 CDH17Q12864 832 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 BTN1A1Q13410 526 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 MADCAM1Q13477 382 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 AANATQ16613 207 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 TATDN3Q17R31 274 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 CEP68Q76N32 757 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 HIPK1Q86Z02 1210 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 PTGR2Q8N8N7 351 aaPredicted RBP20.8■□□□□ 0.92
SDF4-206ENST00000478938 TTC29Q8NA56 475 aaPredicted RBP20.8■□□□□ 0.92
SDF4-206ENST00000478938 OR2T12Q8NG77 320 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 USB1Q9BQ65 265 aaKnown RBP20.8■□□□□ 0.92
SDF4-206ENST00000478938 C11orf84Q9BUA3 381 aaPredicted RBP20.8■□□□□ 0.92
SDF4-206ENST00000478938 GTPBP2Q9BX10 602 aaKnown RBP20.8■□□□□ 0.92
SDF4-206ENST00000478938 SRRQ9GZT4 340 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 DYRK4Q9NR20 520 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 ALG5Q9Y673 324 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 ITGB3P05106 788 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 ATF6P18850 670 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 HLA-DMAP28067 261 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 SLC19A1P41440 591 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 TKTL1P51854 596 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 LIPIQ6XZB0 460 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 PGBD5Q8N414 524 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 ZNF675Q8TD23 568 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 DNAJA4Q8WW22 397 aaPredicted RBP20.8■□□□□ 0.92
SDF4-206ENST00000478938 CAMKK2Q96RR4 588 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 CYP2S1Q96SQ9 504 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 MIOSQ9NXC5 875 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 HSPE1-MOB4S4R3N1 261 aa20.8■□□□□ 0.92
SDF4-206ENST00000478938 OR5K4A6NMS3 321 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 NFICP08651 508 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 SCN1BQ07699 218 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 QPRTQ15274 297 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 FAM98CQ17RN3 349 aaKnown RBP20.79■□□□□ 0.92
SDF4-206ENST00000478938 FBXO48Q5FWF7 155 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 GPR158Q5T848 1215 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 PPP1R26Q5T8A7 1209 aaPredicted RBP20.79■□□□□ 0.92
SDF4-206ENST00000478938 PKN3Q6P5Z2 889 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 KIF18BQ86Y91 864 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 LURAP1LQ8IV03 231 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 TMEM192Q8IY95 271 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 C9orf62Q8N4C0 152 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 OR7D4Q8NG98 312 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 BLOC1S5Q8TDH9 187 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 SH3RF2Q8TEC5 729 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 DCLRE1CQ96SD1 692 aaKnown RBP20.79■□□□□ 0.92
SDF4-206ENST00000478938 PPIL3Q9H2H8 161 aaKnown RBP20.79■□□□□ 0.92
SDF4-206ENST00000478938 MGAMO43451 1857 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 DOCK5Q9H7D0 1870 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 NT5C1B-RDH14C9J2C7 533 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 LINC01387J3KSC0 135 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 MRPS14O60783 128 aaKnown RBP20.79■□□□□ 0.92
SDF4-206ENST00000478938 ARHGDIAP52565 204 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 LIMK1P53667 647 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 ASAH1Q13510 395 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms